Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi253g00024 ATGTGCCTACCCTGCCTCATCGGAGAAGCATCCCATTCCCGACCTCACCTCACAATGGCTCACACCCGCTTTGCTTTTTCTCTCCTTTTCTCTTTCATCTTTGCTGCTCTCGCCAATACTGACCCTTCTGATGTTCAAGCACTTGAGGTCATATACAACTCGTTAAATAGTCCATCTCACCTAACGGGTTGGAAAATCGGTGGTGGTGATCCATGTGGAGAGTCATGGAACGGGGTTACATGTGAGGGTTCAGCCGTTGTTTCCATTGAGCTATCCGGTTTAGGACTCAATGGTACATTGGGGTACCTACTTTCAGACTTTATGTCACTGAAAAAGCTTGACTTGAGTGACAACAATATCCATGATGCAATTCCCTACCAGCTGCCGCCAAATCTTGCAAGCTTGAATCTAGCAAGCAATAACTTAAGTGGAAATCTTCCTTATTCCATTTCTGCAATGGTTTCCCTTAATTATCTGAATGTTAGCCACAATGCACTTTCCCTGTCAATTGGAGACATTTTTTCTAATCATTCTGACCTTGGGATCCTGGATATATCATTCAATAACTTCTCTGGGGATCTTCCTGGTTCACTTGGTGCATTGTCTAACCTTTCTTCTCTCTTCTTGCAGAACAATCAGTTGACTGGCTCTCTTAATACTCTTGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATCATTTCAATGGATGGATACCTCATGAGCTTAATTCAGTTCATAAGTTTATATATGGTGGAAATTCTTTTAACAACAGCCCCGCTCCTCCTTCACCACCATTTACAGCGCCTGCACCTGGAAGATCTGATGACAATAATATTAATAATCATGGTTCTTCATCCAGTTCACATAATAAAATCCTTGGTTCTGATCATGAAAATTCTGAGGGCCATAAGGGTTTGACAGCTGGAGTCATTGTTGGAATTATTTTAGGTTTAGTGTTTGTTGCTGTCATTGTGCTACTTGCTCTTGTTTTCTGTATCCAAAAGCAAAAAATGAAGGAGAAAGGTCCAAGAACATTTAGTGGGAGTCTTCCTCTTGGAATTGTTAATGAGACTCCTCAGATTCAAGAACAAAGGGTAAAAAGTGCTGTTGTTATTACAGATCTGAAGCCTCCTCCTGCAGACAAAATGATGGTTGAGAGAATACCTGCAAAAGATGGGTCTGTAAAGCAAATGAAGCCCCCTATAACTGCTACATCATACACAGTTGCTGCTCTCCAAAGTTCAACAAATAGCTTTAGTCAAGAATTTCTTGTTGGTGAAGGTTCTCTTGGTCGAGTTTACAAGGCTGATTTCCCAAATGGGAGGATCATGGCCATCAAGAAGATAGACAACACAACACTATCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATCTCACACTTGAGACACCCAAACATTGTTGCGCTAACAGGATATTGTGCAGAGCATGGGCAACGTCTTCTAGTTTATGAGTATGTAGGAAATGGAAATCTACATGACATGCTCCATTTTGCTGAAGATAGCAGTAAGGCTTTATCTTGGAATGCCCGTGTACGCATAGCACTCGGCACAGCTCGAGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCAGAAAATATATTACTTGATGAGGAGCTCGAGCCTCACCTGTCTGACTGTGGTTTGGCTGCTCTAACCCCAAAAACTGAGCGACAGTGCTCCAGAATTTGCATATCCGGAATTTACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTTATGTTGGAGCTATTGACTGGTCGTAAGCCGCTTGACAGTTCACGGGTTAGATCAGAGCAGTCACTTGTGAGGTGGGCTACTCCCCAGCTCCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAATGGCATGTATCCTGCAAAGTCACTGTCACGCATTGCCGATATCATTGCCCTGTGTGTTCAGCCTGAACCTGAATTTCGACCTCCCATGTCTGAGGTGGTGCAAGCATTGATACGGTTAGTGCAAAGAGCAAATGTGGTTAAACGGCGTCCCAGTGATGAATCTAGTTTCGGTCACAGAACGCCAGAATTATGA 2133 0.4252 MCLPCLIGEASHSRPHLTMAHTRFAFSLLFSFIFAALANTDPSDVQALEVIYNSLNSPSHLTGWKIGGGDPCGESWNGVTCEGSAVVSIELSGLGLNGTLGYLLSDFMSLKKLDLSDNNIHDAIPYQLPPNLASLNLASNNLSGNLPYSISAMVSLNYLNVSHNALSLSIGDIFSNHSDLGILDISFNNFSGDLPGSLGALSNLSSLFLQNNQLTGSLNTLVGLPLDTLNVANNHFNGWIPHELNSVHKFIYGGNSFNNSPAPPSPPFTAPAPGRSDDNNINNHGSSSSSHNKILGSDHENSEGHKGLTAGVIVGIILGLVFVAVIVLLALVFCIQKQKMKEKGPRTFSGSLPLGIVNETPQIQEQRVKSAVVITDLKPPPADKMMVERIPAKDGSVKQMKPPITATSYTVAALQSSTNSFSQEFLVGEGSLGRVYKADFPNGRIMAIKKIDNTTLSLQEEDNFLEAVSNISHLRHPNIVALTGYCAEHGQRLLVYEYVGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSENILLDEELEPHLSDCGLAALTPKTERQCSRICISGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRIADIIALCVQPEPEFRPPMSEVVQALIRLVQRANVVKRRPSDESSFGHRTPEL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi253g00024 710 MobiDBLite consensus disorder prediction 261 301 - -
Sebi253g00024 710 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 29 686 IPR046959 -
Sebi253g00024 710 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 41 268 - -
Sebi253g00024 710 MobiDBLite consensus disorder prediction 275 295 - -
Sebi253g00024 710 Pfam Protein tyrosine and serine/threonine kinase 427 683 IPR001245 GO:0004672|GO:0006468
Sebi253g00024 710 ProSiteProfiles Leucine-rich repeat profile. 203 225 IPR001611 GO:0005515
Sebi253g00024 710 SUPERFAMILY Protein kinase-like (PK-like) 400 683 IPR011009 -
Sebi253g00024 710 Gene3D Phosphorylase Kinase; domain 1 384 498 - -
Sebi253g00024 710 Pfam Leucine rich repeat 109 166 IPR001611 GO:0005515
Sebi253g00024 710 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 387 498 - -
Sebi253g00024 710 Gene3D Ribonuclease Inhibitor 41 310 IPR032675 -
Sebi253g00024 710 Gene3D Transferase(Phosphotransferase) domain 1 499 703 - -
Sebi253g00024 710 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Sebi253g00024 710 ProSiteProfiles Leucine-rich repeat profile. 109 130 IPR001611 GO:0005515
Sebi253g00024 710 ProSiteProfiles Protein kinase domain profile. 421 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi253g00024 710 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 499 697 - -
Sebi253g00024 710 SUPERFAMILY L domain-like 40 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi253g00024 Sebi-Chr253 266981 271971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi253g00024 153 709 Strubbelig Receptor Gene Family AT4G22130 65.789 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi253g00024 PK_Tyr_Ser-Thr 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi253g00024 - - gmx:100781455 1014.22