Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi253g00014 ATGGCAAAAGTAAGAGAAACCAGGGAAAAAGAGGTGGCAACTTTACACATAAGTGGGTTTGATTGGGTCATGCAGGGGTTTGGGTTTTTCGTGGTGGCTTCTGATCTCATCTCAGCATATTCTTTCGATCCCAGAAGCAAGAGATCGCTCCTCAACATAACATTGCCTCGTTCACTCACTGTTTTCGATTTTGGCGCCAAAACCATGAAGCTAGAAAACTCCTCCAACGGCCAGATGTCCTTCGCCGGTGACGTTTCGCCGCCGCATCATTACGCTGACGACGCCGAGGAGATATTCGTGCCGCCGCTGAATTTCGCGATGGTCGACAATGGCATTTTTAGGTCTGGCTTTCCCGATGCTGCCAACTTCGGATTCTTGAAATCCCTTCGTCTCCGTTCCGTAATATGTTTGTGCCCTGAACCGTATCCAGAAGCGACTGCGGAGTTATTGAAGGCCAACGGAATAAGGCTTTATCAATTTGGGATCGATGGCTGTAAGTGCTGGATACAATTCAATTAG 519 0.4817 MAKVRETREKEVATLHISGFDWVMQGFGFFVVASDLISAYSFDPRSKRSLLNITLPRSLTVFDFGAKTMKLENSSNGQMSFAGDVSPPHHYADDAEEIFVPPLNFAMVDNGIFRSGFPDAANFGFLKSLRLRSVICLCPEPYPEATAELLKANGIRLYQFGIDGCKCWIQFN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi253g00014 172 Gene3D Protein tyrosine phosphatase superfamily 98 170 IPR029021 -
Sebi253g00014 172 Pfam Tyrosine phosphatase family 100 166 IPR004861 -
Sebi253g00014 172 PANTHER TYROSINE-PROTEIN PHOSPHATASE 92 161 - -
Sebi253g00014 172 PRINTS Plant and fungal dual specificity phosphatase signature 99 116 IPR020428 GO:0016791
Sebi253g00014 172 PRINTS Plant and fungal dual specificity phosphatase signature 136 149 IPR020428 GO:0016791
Sebi253g00014 172 PRINTS Plant and fungal dual specificity phosphatase signature 155 169 IPR020428 GO:0016791
Sebi253g00014 172 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 99 165 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi253g00014 Sebi-Chr253 150645 151697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi253g00014 63 167 Protein tyrosine phosphatase (PTP) family AT1G05000 52.381 4.84e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi253g00014 K18045 - gmx:100785520 158.303