Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00074 ATGGGGTGGGATCTCTTTGAGTGCTGCTTCACTAGAACTTCTTCTAACACATTTTCAAATCACAAATACTGGATTCAGAATGAGGTTGATAGTCTTGCTACCATTTTAAGCACAAAAGTTGAAGACCAAGCTTTGTTGGAGTTCTTCGATCCTGGACTTGGCTTCCAATCCGACCTTAAGATCAAGCAGATGATGATTGCTACTGCTGAGCTTGCGTCTCAGTGCTTGCGATGTCCACTAGAATTAAGGCCAAGCATGGAACAGGTGCTAGAGACTCTTAATGGCATAAAGCAAGGGAAATATGAAACAAGTCCGATGAAAGCTTTCAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAATCATTTTGACACTTTCCTTGGAAAGGGAGGGTTTGGCACAGTCTACTATGGAAAACTTAAAGATGGGCGAGAGGTTGCAATAAAACGTTTCTATGGGGAGACAGACAAAACCATTAAGCAATTCATGAAAGAAATTGAGATCTTATGTCTCTTGCAACATCAAAATCTGGTTTCACTCTATGGCTGTAGTTCTCGTCATAGCGACAAATACATGCTAGTGTATGAGTACATCTCCAATGGCACTCTTTCTGAGCATCTTCGTGAATCTTCTTGTGGTAAACTAGCATGGCCTACTAGACTGAATATTGCCATTGAAACTGCAACCTGCCTTGCAGTGGCAGAGTTAGCATTTCAGTGCGTGCAGTGCCCCAAGGATCTTAGACCATCCATGAAACAGGTGTTAGAGACCTTAGAGGGCATAAGAAAGGGGACATGGGGATTCAACCAGATTACTTAG 822 0.4234 MGWDLFECCFTRTSSNTFSNHKYWIQNEVDSLATILSTKVEDQALLEFFDPGLGFQSDLKIKQMMIATAELASQCLRCPLELRPSMEQVLETLNGIKQGKYETSPMKAFKIFHHAELEEATNHFDTFLGKGGFGTVYYGKLKDGREVAIKRFYGETDKTIKQFMKEIEILCLLQHQNLVSLYGCSSRHSDKYMLVYEYISNGTLSEHLRESSCGKLAWPTRLNIAIETATCLAVAELAFQCVQCPKDLRPSMKQVLETLEGIRKGTWGFNQIT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00074 273 ProSitePatterns Protein kinases ATP-binding region signature. 128 150 IPR017441 GO:0005524
Sebi252g00074 273 Gene3D Transferase(Phosphotransferase) domain 1 117 236 - -
Sebi252g00074 273 SUPERFAMILY Protein kinase-like (PK-like) 103 233 IPR011009 -
Sebi252g00074 273 Pfam Protein tyrosine and serine/threonine kinase 124 232 IPR001245 GO:0004672|GO:0006468
Sebi252g00074 273 ProSiteProfiles Protein kinase domain profile. 122 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi252g00074 273 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 31 101 IPR044652 GO:0004672
Sebi252g00074 273 Gene3D Transferase(Phosphotransferase) domain 1 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00074 Sebi-Chr252 1227379 1229626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi252g00074 31 98 Receptor kinase-like Gene Family AT1G25390 35.294 1.34e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sebi252g00074 PK_Tyr_Ser-Thr 9.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00074 - - mtr:25496807 325.479