Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00072 ATGGGAACAGACTTAGGGCACCCTTCTCGAGAACAAAATAGTTTCAACGACAAAGAGAATGTCGAGTTCAATTCAAAGGAGGAAGCTTTCTCATATTACAGAGAATATGCCAAATCAATGGGATTCTCTGCCATCATTAAAACTAGTCGTCGATCTCGAATCTCTGGAAACTTCATTGATGCCAAATTCGCATGCACCAGATACGAAAACAAGCCAAAGCCACAATCTTTTTCAACCCCATCGAGCAATGACATGGGCAGTTCGGGACGTGAAGATCGAGCACTTGCTTACCGAATTGCGATTGCTGCGTTCATGTTTCAGCAACGAACAGCTCCAGAAGCCCGTGTTAGAGGTTTTCAAAGAAACTCTACCAAACCTTTCGATTGTGAATGA 393 0.4326 MGTDLGHPSREQNSFNDKENVEFNSKEEAFSYYREYAKSMGFSAIIKTSRRSRISGNFIDAKFACTRYENKPKPQSFSTPSSNDMGSSGREDRALAYRIAIAAFMFQQRTAPEARVRGFQRNSTKPFDCE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00072 130 Pfam FAR1 DNA-binding domain 31 76 IPR004330 -
Sebi252g00072 130 MobiDBLite consensus disorder prediction 1 20 - -
Sebi252g00072 130 MobiDBLite consensus disorder prediction 71 88 - -
Sebi252g00072 130 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 69 - -
Sebi252g00072 130 MobiDBLite consensus disorder prediction 70 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00072 Sebi-Chr252 1203934 1204530 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi252g00072 FAR1 6.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00072 - - pcin:129315780 95.9005