Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00067 ATGTCAAAACCCCTGTACTCCCTGTTTGCACTATTCATCATCCTTGTGACATGTTATGCTGATAGCTCTAACACATCATCACTATGTGCTCCTTCGGTTTGTGGTAACGTTTCCATTCGCTACCCCTTTTGGATGCGATCTAACACCACCGTTGCCGGAGAATATTGCGGTTATCCTGAATTTGGGATTGAATGCTCTGAAGGCAACAAGGCCATCATCAATTTGCCAAAAGACAAATACTATGTGACAGATATAAACTATGAGATTCATTCAATTACACTTATTGACATAGATGTATTGAGCCAATCATGTCCAAGGGCACGACACAATGTTACCTTAGACAACCTCCCTTTGGATTTCAACTCATCATTAGACTTGAATCTCAATTTCTACTTCAACTGCAGTTCTGCCCCTTCATCTGTGGAGCCTATAGGGTGCTGGGAACTCAGTAATGACAAGAGGAAGTCTTATGTGTTTCCAGAGGGGGATGAATCTGATCATGGCTCTGATTGGAGCTGTGGGGATCATGTTGTGGTTGCTGTGAAGCATAGTGAGATTGATATTAGTACTACCACTGGTTTGCTAACTGGATTTGGTGACGCTATGAAGAAAGGGTTTGTGCTTGATTGGAGGAGGGCTGTGGATTGTGCTGATTGTGAGCAGTCTGGCGGAAATTGTGTATACAATGAAGCTACTAGGCAATCAATGTGCCAATGCAGAGATGGCAGATTTGCTGCTAAAAGTTGCAAGAGAAAAGGCAAAGTGAATTGGGAGAGGAAACTCATTATAGGTGTTGCTTCTGCTGTGTTAGGAGCACTTGCAGTGATCGCTGCCATCTTTTTCTATAGGCGCCGAAAGAATAATTATTCAATATCATATATGCAATCTCGGAGCCTCTCTTCTGATCTATCTTCAAAAGACCCTGAGAAAGGAAGCCAACACTTTGGAGTTGGAGTGCACCTCTTCACTTATACTGAACTTGAAGTTGCCACAAACTACTTTGACCCATCTAAAGAACTAGGAGAAGGGGGCTTTGGGACAGTGTATTATGGAAAACTGCGGGATGGCCGAGGTGTTGCAGTGAAAAGGTTGTATGAGAACAATTATAGGAGAGTTGAGCAATTCATGAATGAAGTTGGGATCCTAACTCGGCATAGGCATGAAATCAATTTGGCCAACATGGCTATTAACAAGATTCAGAATCAAGCACTGCATGAGCTTGTGGACAAATCCCTTGGGTTTGACTCAGATTTCAAGGTAAGGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGCTTGCAGAGTTCCAAAGATATGAGACCTTCTATGGATGAAGTGTTGGATACTCTCAAGGATATACAGAGTGATGGAAAATATAAAAGCCAACCTGAGGTAATGGATATCACAAGCTCAGCTGATGATGTTGTGTTGCTGAAGGATGACCCACCTCCACCATCACCGGATTCAAATGTTGTAAGCAAGTCTACAACACCAAATGCTAGCGGATAA 1515 0.4257 MSKPLYSLFALFIILVTCYADSSNTSSLCAPSVCGNVSIRYPFWMRSNTTVAGEYCGYPEFGIECSEGNKAIINLPKDKYYVTDINYEIHSITLIDIDVLSQSCPRARHNVTLDNLPLDFNSSLDLNLNFYFNCSSAPSSVEPIGCWELSNDKRKSYVFPEGDESDHGSDWSCGDHVVVAVKHSEIDISTTTGLLTGFGDAMKKGFVLDWRRAVDCADCEQSGGNCVYNEATRQSMCQCRDGRFAAKSCKRKGKVNWERKLIIGVASAVLGALAVIAAIFFYRRRKNNYSISYMQSRSLSSDLSSKDPEKGSQHFGVGVHLFTYTELEVATNYFDPSKELGEGGFGTVYYGKLRDGRGVAVKRLYENNYRRVEQFMNEVGILTRHRHEINLANMAINKIQNQALHELVDKSLGFDSDFKVRKMINAVAELAFQCLQSSKDMRPSMDEVLDTLKDIQSDGKYKSQPEVMDITSSADDVVLLKDDPPPPSPDSNVVSKSTTPNASG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00067 504 Gene3D Phosphorylase Kinase; domain 1 305 404 - -
Sebi252g00067 504 Pfam Wall-associated receptor kinase galacturonan-binding 29 96 IPR025287 GO:0030247
Sebi252g00067 504 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Sebi252g00067 504 Pfam Wall-associated receptor kinase C-terminal 151 242 IPR032872 -
Sebi252g00067 504 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 387 IPR044652 GO:0004672
Sebi252g00067 504 MobiDBLite consensus disorder prediction 474 504 - -
Sebi252g00067 504 ProSiteProfiles Protein kinase domain profile. 334 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi252g00067 504 Pfam Protein tyrosine and serine/threonine kinase 337 392 IPR001245 GO:0004672|GO:0006468
Sebi252g00067 504 SUPERFAMILY Protein kinase-like (PK-like) 311 388 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00067 Sebi-Chr252 1142107 1157755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi252g00067 6 394 Receptor kinase-like Gene Family AT5G38260 27.114 4.99e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sebi252g00067 WAK_assoc 1.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00067 - - gmx:100796618 350.132