Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00063 ATGACTAACTCATTCAAAGAAAAGTTGGGTCAAGGTGGTTTTGGTGCTGTATACAAAGGAAAGCTAGTAAGTGGTTGCCCTGTCGCAGTAAAGATACTGAATGCATCCAAAGGAAATGGTGAAGAGTTTATCAATGAGGTTGCTAGCATTAGTAGAACCTCTCATGTCAATGTTGTCACCCTTCTTGGATTTTGTTTTGATGGTGGCAAGAAAGCACTCATCTATGAATTTATGTCTAACGGTTCTCTTGACAAACTTGAGATGAACAATGATTTGAGACCTGATGAGGTGATGACGACCGAAGAAAATGTCATCGCAAGGAGAATGACTATAGTTGGTTTATGGTGCATTCAAACATTTCCAAGTGATAGACCTACAATTAGTAAAGTGATAGATATGTTGGAAGACAACAATGATCCCTTGGAAATACCACCCAAGCCTATGCATTCTTCTCCAACTAGATCAATACCAGAATCTTCCACTTCTTGA 489 0.3906 MTNSFKEKLGQGGFGAVYKGKLVSGCPVAVKILNASKGNGEEFINEVASISRTSHVNVVTLLGFCFDGGKKALIYEFMSNGSLDKLEMNNDLRPDEVMTTEENVIARRMTIVGLWCIQTFPSDRPTISKVIDMLEDNNDPLEIPPKPMHSSPTRSIPESSTS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00063 162 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Sebi252g00063 162 PANTHER RUST RESISTANCE KINASE LR10-RELATED 97 151 IPR045874 GO:0004672
Sebi252g00063 162 Pfam Protein tyrosine and serine/threonine kinase 5 86 IPR001245 GO:0004672|GO:0006468
Sebi252g00063 162 MobiDBLite consensus disorder prediction 138 162 - -
Sebi252g00063 162 Gene3D Transferase(Phosphotransferase) domain 1 1 102 - -
Sebi252g00063 162 ProSiteProfiles Protein kinase domain profile. 3 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi252g00063 162 SUPERFAMILY Protein kinase-like (PK-like) 5 98 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00063 Sebi-Chr252 1083787 1084701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi252g00063 1 85 Receptor kinase-like Gene Family AT5G38280 74.419 9.63e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sebi252g00063 PK_Tyr_Ser-Thr 1.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00063 - - mtr:25496836 155.221