Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00044 ATGACAAAGGTGTGGACTTGTTGGGGAGAATACATGATAGTAACTTTAGACATGTGGTCAATTGTAACTAGTGAATTTTTGTTGTATAAAACTCAAACTACAGCTTTCACCAAATTCTCTTTTTTGTCTTCAGTTGTGAAGATGTACACATCAAGGAAGAAAATTCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTAGAAAACACCAACCATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCAGTCCAAATTGATGTTTCTGGCAACCGTAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGTTTCCGCAAGATTCATGTTAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGTGGCAAGGATGTAATCTTGGTTGCCACCCGGAGGATATTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCACCCGTACACTCACTGCTGTGCATGAGGCAATGCTGGAGGATATTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTTAGGTATCGAGTTGATGGATCCAAGATTATGAAGGTTTTTTTGGACCCCAAGGAGCGAAACAATACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAATTTTCGGGCAAAGATGTTGTGTTTGAGTATCCAATTACTGAGGCTTAG 717 0.4128 MTKVWTCWGEYMIVTLDMWSIVTSEFLLYKTQTTAFTKFSFLSSVVKMYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNHELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPITEA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00044 238 Pfam Ribosomal protein S7e 54 233 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sebi252g00044 238 ProSitePatterns Ribosomal protein S7e signature. 126 139 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sebi252g00044 238 PANTHER 40S RIBOSOMAL PROTEIN S7 48 237 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00044 Sebi-Chr252 794870 796620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi252g00044 48 238 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 8.89e-114 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00044 K02993 - gmx:100499757 367.466