Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00026 ATGGCAGAGCCATCAGGTGCATTAATAAACCAAGTAGGTCATAATAAGTTACATGAGGTGTTTCAACTGAAACATGGAGGCTATGCTGATCTTCCTGCTGCAAGAATTTCAGAACTAATGAAATCAACCAGTTTGGATAATGCTCCCACTCAATCGCTTTTAAGTGTTGTGAATGGTATCTTGGAAGAAAGTGTTGAAAGAAGAAATGGCGAAATACCACATCGTGTGGCTTGCTTGTTGAGAAAAGTTGTCCAAGAGATTGAGCGGCGAATATCAACTCAAGCAGGACATTTAAGAACTCAAAACAATCTTTTTAAGGCCCGGGAAGAAAAATATCAATCAAGAATCAAAGTACTTGAGGCTCTTGCTTCTGAATCCCGGGAAGAGAATGAGATTGTTGCAACAAGTCAGATTCAGAAGTTAAAGACTGAGAAGACTAATAAGGAAGAAAAGAAGGTAGATGATTCAAAACAGATTGAGAAGACCATAAAAGAAGAAAAGAAGGTAGATGATTCAAAACAGATTGAGAAGACCATAAAGGAAGAAAAGAAGGCAGATAGTTCAATACAGACTGAGAAGATTAAGAATGAGGAAAAGAAGACAGATGACTCAATACAACATGAGAAGACTAAAATGGAAGAGAAGAAGGCAGATGACTTAATACAGACTGAGAAGACTAAAATGGAAGAAAAGAAAGATGTCTCAACACAGACTGAGAAAACAAAAGAGGAGGAAAAGAGGGTAGATGATAAAGAAATTATTAGATTGAATAAAGAGCTGGATGACAAAAACATGGAAATTTCAACATTGAAGCAAGAACTAGAAAAAATGAGAAAAACATATGAAGTACAATGCTCACAGTTGGAAGCACATGCTGCGGATGCTAAAGGAGAACTGAAACAGAAATCACAAGAATATGAGAATCAGTTGGAAAGATTAAGAAATAAGGTTAAAGAGAATGAGGCCTTTACTGAGTCTAAATATCAGAAGTGGATCATGAAAGAGAAACAAATACAGAAAGCTGTCACTTTTCAGTTTAGTTCCATACAGAAATTGAAATTGTCATGGGAATCCATTAAGCAAGATGTTATGAAAGGGCAAATGGTTTATGCAGAGGAATGTAATCGATTAGGTGTAAATCTTAAATCACTAATAGATGCAGCTGAGAGTTATCAATCAGTTCTTTCAGAAAATCGAAAACTGTTTAATGAGATTCAAGAATTAAAAGGAAATATCAGAGTATATTGTAGACTCAGACCATTTCTACCTGGACAAAAGGAAAAACAGTCTATTGTGGAACACATTGGTGAAACTGATTTGGTTGTGGCAAATCCCTCCAAACAAGGAAAAGAAGCCCTTAGAACATTTAAGTTTAACAAGGTCTTTGATCCAGCCTCAACTCAAGCTGAGGTATATGCTGACATACAAGGCTTTATAAGATCAGTACTTGATGGGTATAATGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACCTACACAATGAGTGGTCCAAATGGTGCAACAAGTGAGACTGTTGGTGTTAACTATAGAGCTCTGAATGACCTCTTCAACATATCCTCAAATGCTAGCATGCAACCTGTGAAATCAACTGCAGATGTCATGAAACTAATGGACATTGGTCTTAAAAATAGAGCCAAGGGTGCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTTTCAATTCATGTTCGTGGGGTGGATAAGAAATCTGGCTCTTCTCTTCAAGGTGGTCAAGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCTGAATCTTTAAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCAAGAAGTACCAAAGAGGGCAGAGATGTCAGAGAATTGATGGAGCAGGTGGCTTCTCTGAAAGATACTATTTTGACAAAAGATGAGGAGATTGAGCGGCTACAGTTACTTAAGGAACTGAAAAATGTTCAGCCCAATGTCAATTCTGAGAAGCTTGAAACTGCCACTGATTGA 2055 0.3732 MAEPSGALINQVGHNKLHEVFQLKHGGYADLPAARISELMKSTSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAGHLRTQNNLFKAREEKYQSRIKVLEALASESREENEIVATSQIQKLKTEKTNKEEKKVDDSKQIEKTIKEEKKVDDSKQIEKTIKEEKKADSSIQTEKIKNEEKKTDDSIQHEKTKMEEKKADDLIQTEKTKMEEKKDVSTQTEKTKEEEKRVDDKEIIRLNKELDDKNMEISTLKQELEKMRKTYEVQCSQLEAHAADAKGELKQKSQEYENQLERLRNKVKENEAFTESKYQKWIMKEKQIQKAVTFQFSSIQKLKLSWESIKQDVMKGQMVYAEECNRLGVNLKSLIDAAESYQSVLSENRKLFNEIQELKGNIRVYCRLRPFLPGQKEKQSIVEHIGETDLVVANPSKQGKEALRTFKFNKVFDPASTQAEVYADIQGFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATSETVGVNYRALNDLFNISSNASMQPVKSTADVMKLMDIGLKNRAKGATAMNERSSRSHSVVSIHVRGVDKKSGSSLQGGQAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKELKNVQPNVNSEKLETATD 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00026 684 Coils Coil 109 129 - -
Sebi252g00026 684 Coils Coil 391 411 - -
Sebi252g00026 684 Coils Coil 637 657 - -
Sebi252g00026 684 ProSiteProfiles Kinesin motor domain profile. 411 684 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi252g00026 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 623 IPR027417 -
Sebi252g00026 684 SMART kinesin_4 409 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi252g00026 684 MobiDBLite consensus disorder prediction 181 244 - -
Sebi252g00026 684 PRINTS Kinesin heavy chain signature 485 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi252g00026 684 PRINTS Kinesin heavy chain signature 559 576 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi252g00026 684 Pfam Microtubule binding 397 535 IPR031852 GO:0008017
Sebi252g00026 684 Coils Coil 253 323 - -
Sebi252g00026 684 Gene3D Kinesin motor domain 588 665 IPR036961 -
Sebi252g00026 684 PANTHER KINESIN-LIKE PROTEIN KLP-3 586 665 IPR027640 GO:0003777|GO:0007018
Sebi252g00026 684 Gene3D Kinesin motor domain 531 587 IPR036961 -
Sebi252g00026 684 Gene3D Kinesin motor domain 352 530 IPR036961 -
Sebi252g00026 684 Gene3D - 249 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00026 Sebi-Chr252 519772 524829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi252g00026 399 589 Calmodulin-binding Proteins AT5G65930 28.395 4.11e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00026 K10406 - gmx:100779403 743.806