Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi252g00025 ATGCGATTAAGTTGCAATGGATGCCGTGTTCTCCGCAGAGGGTGCAATCCTGAATGTCCAATTAGGCCCTGCCTCCATTGGATCCATTCCCCTGACTCTCAGGCCAACGCCACCCTCTTCCTCGCCAAATTCTACGGCCGTGCTGGCCTCCTCAACCTCCTCACCGCCGCACCTCAGCAACTCCAACCAGCGGTTTTCAAATCCTTGCTCTACGAAGCTTGTGGCCGGATCGTGAACCCGGTTTTCGGCTCGACCGGATTGCTCTCGACCGGGAGCTGGCACTTGTGTGAAGCCGCCGTTAAAGCCGTTCTAAGCGGCGCGCCGATTCAGCAGGCTCCATCTTTCGACGGTGCTGTTAGTCTGCAGCTTCAGGCATGCGATATTCGCCACGTGGCAAAGAGTGTGGGGCAATCGTGCGGCTCTGATAGGCTCCACAAGGTTAAGTCTCATACGAGGCAGTTCAAGCGGCGAGGGTTGAAACCGAAGCAAGAAGTGGTGGTGGCTTGTTGTGGAAGCAAGTTGGAAGGTTCGGTGAGTCATCATGAGTCTGGAGTGAGTGATAGCAGTTCCGTTGAGAGTGTGGCTCCAGCTCATGATGATCAAGAATTGGAGCTGGAGTTGACTTTGACCTTGGGGTGTGGGGTCCAGTGA 651 0.5545 MRLSCNGCRVLRRGCNPECPIRPCLHWIHSPDSQANATLFLAKFYGRAGLLNLLTAAPQQLQPAVFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVKAVLSGAPIQQAPSFDGAVSLQLQACDIRHVAKSVGQSCGSDRLHKVKSHTRQFKRRGLKPKQEVVVACCGSKLEGSVSHHESGVSDSSSVESVAPAHDDQELELELTLTLGCGVQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi252g00025 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 208 - -
Sebi252g00025 216 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Sebi252g00025 216 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi252g00025 Sebi-Chr252 507438 508541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi252g00025 1 209 AS2 family AT1G68510 47.436 2.43e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi252g00025 LOB 4.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi252g00025 - - ccaj:109797229 277.715