Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi250g00038 ATGAAGTGCTATAAATACAGGTGGATGCTACGGTGGGTTACAATCAATGTGCCTCCCGGGTGGTGCAACATTTTGACTGCTTGTAACCAGTTATTGTCCGTTGCAACCCGATCTGTTAGTGGAAGAGAAGGCGGGGCAGACTCTGTTGTTTATTCAATACAGAGTCGAAGAGAAGACGACGCGTACTCTGTTGTGGCTCTGTTCGTTGAATCTCCGCCGAGATCTGATTTGATTGTGATTAGAGGCATAGAAAATTTTTCATCAAATTTGAGTAGTGCGGAGACGGTTGGCGGGGGTATTGGAGGTATGAATTTGAGTTCTGAAAATGGTGAACAAGGTAGTGGTTCATTTTTTGTTGAGGATGAAAATGGGGGTGTTTTTGTAGTTGATGAGAATTGGGTTGAGAAAGGTGTAGTTGGTGATGAAGGACTTGGAGATAGTGGTTGTGATAAGGACAGTGGAGACGTATTCTTTGTTGATGATGAAAATGGAGGTACTTTCTTAGTGGGACAGGACTGGGAAGAGAACAATGCAGAAAGAGATAGAGATGAAGGGGAGAATATTTTAATTCATAGCGAGGATGATATTTTGAATATGGGTGATCTTAGTGTTTTCAGTCCTCACGAAATAGAGAACTATGAATTTAGTAATATGGAAGTGGCATTCAAATTCTATTTTGAGTATGGAAAAGCTAATGGTTTTGGTATACAAAGGGGTAGAACTTTGAGGTCTAGAAAAACGTTGGAGGAGTATCAAAAGGAGTTTATGTGTTGTAGAGCAGGTGTCCGTGAAGATCGCGGTTTGAAAATGGAAGATAGGGTCGGCATTAGGCCACCCAATATATTTAGTACATTTGCTAGCCAGTCAGGAGGTTATGAGAAGATTAGGTTTAGAAAGAAAGACATGTATAACAAGATCAATGAGCAGAGGAGGAAGGTTTGTTCTGATGCTAAAGGTGTTGTCCAATACCTTGGTGAGATTCGATTGAATGACAATATGATGTATTTTGAACACACTGTTGATCCAGAAGGAAGGCTACAACATCTTTTTTGGAGTGATGGTATCAGTCAAATAGATTACAAGTTATATGGGGAGGTGTTGGATTTTGATGCAATGTATGGTAAAAATAAGTATTTTATGCCATTAGTTGTATTCTCAGGTGTTAATAATCATAATCGATCCACGATCTTTGTTGCTGCTATTATTGCAAATGAGATTGAGGAGACATATGTTTGGGTTTTGGAGCAGTTTTCAAAAGCAATGAAAGGTAAATTGCCGAATGCTGTAATTACGGATGGGGACGTAGCCATGAAAAATGCCATTGAAAGGGTTTTCCCTAATGCGTATCACTGTTTATGTGCTTGGAACCTGATGAGAAATGCGACATCCAATGTAAAAAATGCAGATTTCTCAAAAGCATTTGAGAACTGTATGCTGGGGTATTATAATGTTGGGACATTTCGCAAGAAGTGGAGTGATTTGGTATCAAATTTTGGACTTGAAGACAACCCTTGGGGCTTCATTGTTGGAAGTTCATGGTTTTACACAAGCAGTTTGATGCACCATATTCAAGGTTGGGACGCAGGTTTGAGTGCTAGGAGGGCTGCACTTAATGGTTTTTACAATCAAGTAAGTGGTTTCAAGGCTGCAACTATGGAAAAATACAATGCGGAGCGGCAGAGGCTACTTGCTGACCTTAGACAATGCAAGGCGGAGAAAGAAACTGAACATGAGTCATCTTGTAACGGAGGGAATGACATGTTGAGGAACCCTTTACGTGCAGCAACTAAGGGCAACGGTGTCGCATGTTCATCTTCAGGCATCAGGGTTAGGAGAAAACAAAATTGTTCAATTTGTAAACTTCCAGGTCACAACAAATTGACTTGTCCAACGCGTGGTAATGTAGTCAGTGAAGAAGATTATGGTGTTGGACCTTCTCACGCCACACAAGAAAATGATGGTGATGCGTATTTTGATTTTGATCCAGAACAATGTAGTGGATTTTGGAGTGCATTTACTGGCCGACAGGAAGGTTTTAAACCACCACATTTCCTGTTGTGCTTCAACTCAAGCAACTCTGGTAATGTTAATGGGAGGTGCAAGTGTGGTATGAATGTATGCAAACGTCATGGACAAAAAAGAACCCGAGAAGGAGGTTTATCGGGTGTTCAAACTACAAGGTAG 2184 0.4071 MKCYKYRWMLRWVTINVPPGWCNILTACNQLLSVATRSVSGREGGADSVVYSIQSRREDDAYSVVALFVESPPRSDLIVIRGIENFSSNLSSAETVGGGIGGMNLSSENGEQGSGSFFVEDENGGVFVVDENWVEKGVVGDEGLGDSGCDKDSGDVFFVDDENGGTFLVGQDWEENNAERDRDEGENILIHSEDDILNMGDLSVFSPHEIENYEFSNMEVAFKFYFEYGKANGFGIQRGRTLRSRKTLEEYQKEFMCCRAGVREDRGLKMEDRVGIRPPNIFSTFASQSGGYEKIRFRKKDMYNKINEQRRKVCSDAKGVVQYLGEIRLNDNMMYFEHTVDPEGRLQHLFWSDGISQIDYKLYGEVLDFDAMYGKNKYFMPLVVFSGVNNHNRSTIFVAAIIANEIEETYVWVLEQFSKAMKGKLPNAVITDGDVAMKNAIERVFPNAYHCLCAWNLMRNATSNVKNADFSKAFENCMLGYYNVGTFRKKWSDLVSNFGLEDNPWGFIVGSSWFYTSSLMHHIQGWDAGLSARRAALNGFYNQVSGFKAATMEKYNAERQRLLADLRQCKAEKETEHESSCNGGNDMLRNPLRAATKGNGVACSSSGIRVRRKQNCSICKLPGHNKLTCPTRGNVVSEEDYGVGPSHATQENDGDAYFDFDPEQCSGFWSAFTGRQEGFKPPHFLLCFNSSNSGNVNGRCKCGMNVCKRHGQKRTREGGLSGVQTTR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi250g00038 727 PANTHER OS01G0519700 PROTEIN 211 269 - -
Sebi250g00038 727 Pfam MULE transposase domain 366 460 IPR018289 -
Sebi250g00038 727 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Sebi250g00038 727 Coils Coil 552 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi250g00038 Sebi-Chr250 863521 867831 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi250g00038 MULE 4.1e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi250g00038 - - vvo:131626876 355.14