Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi250g00024 ATGAGTACATCCAGTAGCACAGGAAGTAACAGTAGTAACATTGCCCAACAATTCAAATGCGATGTATGTAGTGAAATGCTTCTATCTATGAATGCTTTGGATCTCCATAGGAAGTCAGTTCATAATATAGACAGTTCAAGTGTGCCAAAGACAAAACAACCCCAACCAGATGTTCAACTTCTACCCCATCCTCTACCTTATGTAGAATATCCAAGACCATTAAAAAACTATGAAGATCAACCTTCTCTACCCTGTCCAGAATGTCCAAGAAAATTTAAAAAAGTGCAAGAGCGTGAACAGCACATGGATAGTGTTCATAAAGAGCAAAGAAAGCGTCGTCATGCAAATATTGATCTGAACACCGCACCAAAGGATTAA 378 0.3862 MSTSSSTGSNSSNIAQQFKCDVCSEMLLSMNALDLHRKSVHNIDSSSVPKTKQPQPDVQLLPHPLPYVEYPRPLKNYEDQPSLPCPECPRKFKKVQEREQHMDSVHKEQRKRRHANIDLNTAPKD 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi250g00024 125 ProSitePatterns Zinc finger C2H2 type domain signature. 20 41 IPR013087 -
Sebi250g00024 125 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 111 IPR013087 -
Sebi250g00024 125 ProSitePatterns Zinc finger C2H2 type domain signature. 85 106 IPR013087 -
Sebi250g00024 125 MobiDBLite consensus disorder prediction 43 63 - -
Sebi250g00024 125 Gene3D Classic Zinc Finger 1 111 - -
Sebi250g00024 125 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 46 IPR013087 -
Sebi250g00024 125 MobiDBLite consensus disorder prediction 94 125 - -
Sebi250g00024 125 SMART c2h2final6 83 106 IPR013087 -
Sebi250g00024 125 SMART c2h2final6 18 41 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi250g00024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi250g00024 - K09228 agrg:126745338 47.3654