Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi250g00023 ATGGACAATGCAGATGAAACCAATAGCAGTTATCTTTTTGCTTTGACCGAACTGATGTGTAATATCATAAGGAAATCTAAAGAACCCCAACTTGTAATAATAGCGGTGGTGGTGTTGGAAAATCTTTTGAGATTAGTACTTGATCTACCAATGGCTGATATGGAAAGCATAGAGAATCTTCAAGCTGCTAGGAAGTGCTTGAAAACTAGCTTAGAAAAATCAAGTGCTATTGCTTCTGCATTAGATGAATCAGGATCAAGATTGAAGCTACTTAACCAGAGATGTCAATCCTTGGAAGCTGAACTTGGACCAATCTCTATGCAAAAGTGCTTATTTGTTGACATTGGAGACCAAATAGATAGTGTTCTTTGTTCTTCTGCTGCAGTCCTCAGGGTATTTGAAGCTGTTCATCAGCTTGAAAATTCTCTCTTGATTGATCCCAGCTCTGATCTATGCACCTATGTCTCAGACACAAAGAAGCTTGAAGAAGCACTGAAGCTTCTCACTGATAATTGCAACTTAGCACTTGGCTGGCTGCAGGGTATTTTTGAGTTCTTTCAAGACAAAGCAATCACCAATGAGCATTGCCTATTGAATGTGAGGAAATCTTTGAGAATACTCCAAGAATTGAAGGCCATGGAAGATGCTCACCTTGATGGAGGTCTTCTAAGTTCTGCCTTTGACAAACTAGAGATTGAGTTCCACAGGCTTCTGATAACAAACACAATGCCTCTTTCTTTGGTTTCATTAGCATCATCCATTGGTCAGCATGCCAGCATTACCACACAAGCTTGGCCAGATTCTGTAACAGGGAAGTTGCAGGCCATTGTTGAGAGATTAAATGCTAATGACAGGTTAGACAAGTGTAAATCTATATATGTTGAAGTTCGAGGTATGAATGCTAAGAGGAGTATGGAGACTTTAGATCTGAGTTACCTTGAGTTTTCAACAGCTGAATTTGAGGATTTAAATGTTATTGAGGGTTACATAGACCAATGGGGCTTGCATTTGGAGCTGGCTGTGAAGCACCTGCTTGAGATTGAGTACATTCTCTCTAGCAATGTCTTTGAGAAAATTGGTCCAGAAGCATGGATGGGGTTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTCTTGAATTTGGAAGGAATGTTACTAGGACTTTTCAATGGGAAAGCTTGTGAAGAAATTAGAACTGTGACAAAGGATCTTATCAACAGAGTTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAACACAAGTGAAGTTATTAAGAACAAGTTCTCCTCCTGCAGATGGCAGTGTTCCTAGGGTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTACTTGGGGATACTTACAGATCACATTTGATACAGGTTCTAGAAATCCATCATAGTTGGAGAAATGAAGTATATGAAGAGGGTATTGTTTTCACCCAAATTTATAACATAATTAAGGAAATTGCTATTAATTTAGATGCTTGGTCAAGGGCCTATGAAGATATAACTTTGTCTTACTTTTTTATGATGAACAACCATTGCCATTTCTACAATTTGGGGGGCACTGAGGTTGGGAATCTGATGGGAGATTCTTGGTTAAGAGCACATGAACAGTACAAGGACTACTATGCAGCACTTTATTTGAAGAACAGCTGGGAAAAACTTCTACCTATTCTCAAAGTTCAGAAAGATTTACTTTCATCCTCCGTGACTAGCCAAGATTTGGTCCAGAGACTAAAGGCTTTCAATCTAGCTTTTGATGAAAGGTATAAGAAGCAATCCAATTGGGCAATCACTGATGAGATCATGAGGGAAAATATATGCAAGCATTTGGTGGAAGGCATTGTACCAACTTATAAGACCTATGTGAAGAACTACAGTTTGTCAATAAAAAATTATGCTAAGGCTGCAAAGAATATAAAATATTCAACGCAGAGTTTGGAGAGCATGATTAGAACTCTGTTTCAGCCCAAACTGAGGAAGTGTGGGAGAACCAAACAAGCAGACTTGATTAGTAAATTAAAACAAGGGAGCAATCAATTTCGTTTGGCTCTTAATGCACTATAA 2082 0.3871 MDNADETNSSYLFALTELMCNIIRKSKEPQLVIIAVVVLENLLRLVLDLPMADMESIENLQAARKCLKTSLEKSSAIASALDESGSRLKLLNQRCQSLEAELGPISMQKCLFVDIGDQIDSVLCSSAAVLRVFEAVHQLENSLLIDPSSDLCTYVSDTKKLEEALKLLTDNCNLALGWLQGIFEFFQDKAITNEHCLLNVRKSLRILQELKAMEDAHLDGGLLSSAFDKLEIEFHRLLITNTMPLSLVSLASSIGQHASITTQAWPDSVTGKLQAIVERLNANDRLDKCKSIYVEVRGMNAKRSMETLDLSYLEFSTAEFEDLNVIEGYIDQWGLHLELAVKHLLEIEYILSSNVFEKIGPEAWMGFLQRLPLNQEFFLFLNLEGMLLGLFNGKACEEIRTVTKDLINRVVNGASEIFWQLPTQVKLLRTSSPPADGSVPRVVSFVTDYCNQLLGDTYRSHLIQVLEIHHSWRNEVYEEGIVFTQIYNIIKEIAINLDAWSRAYEDITLSYFFMMNNHCHFYNLGGTEVGNLMGDSWLRAHEQYKDYYAALYLKNSWEKLLPILKVQKDLLSSSVTSQDLVQRLKAFNLAFDERYKKQSNWAITDEIMRENICKHLVEGIVPTYKTYVKNYSLSIKNYAKAAKNIKYSTQSLESMIRTLFQPKLRKCGRTKQADLISKLKQGSNQFRLALNAL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi250g00023 693 Coils Coil 81 101 - -
Sebi250g00023 693 PANTHER EXOCYST COMPLEX PROTEIN EXO70 196 660 IPR004140 GO:0000145|GO:0006887
Sebi250g00023 693 Gene3D Exocyst complex component Exo70 187 667 - -
Sebi250g00023 693 Pfam Exo70 exocyst complex subunit 386 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi250g00023 693 SUPERFAMILY Cullin repeat-like 129 660 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi250g00023 Sebi-Chr250 490337 492497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi250g00023 56 680 EXO70 exocyst subunit family AT4G31540 45.263 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi250g00023 K07195 - gmx:100777662 855.899