Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi250g00019 ATGGACAATAAGTTTAGTGTATCAAGAGAAAATTCTGCCAATTTAAGAAGTCCACCACCACCACCAAGCAATTCATTTGGGGGTCTACTCAATGCCACATTTGGAAATGCAACTGAAATGATTATATCAATTTATGCATTAAAAAGCGATATGATTAGGGTTGTTCAACAGTCTTTACTTGGCTCAATATTATCAAATATGCTTCTAGTTCTTGGGTGTGCATTCTTTACTGGTGGGATTGTCCACCACCAAAAGGTTCAGGTTTTCAATAAGAGCTCACATCTTACTTGGCCTTTGCAACAGGCAGCTGCTGTTGTCAATTCTGGGTTGCTGTTGATGGCTGTAATGGGAATATTATTTCCCGCTGTTCTTCACTTTACTCATTCAGAGGTTCATCTTGGGAAGTCGGTGTTATCTCTATCAAGATTTAGCAGCTGTATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAACTTAAAAGTCAGCAAAATTCTTATAGTCCAGTTAATGAGGAAGTAGATACAAGTGAAAATTCCGATGAAGAGGAAGAAATTGAATTAACTCAATGGGAAGCGATAATCTGGCTTGCTATTTTGACAGCATGGGTATCTGTATTGTCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAGTCATTGAATATGTCAGTGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCTGTGAAGGACAAGCTTGTAAGTGGTTTTCAAAGCCTATTCTTTATTCTGTGGATACTGTTTAACTTGTTAATGGGTTCAATTTCTCCACAGGATATCACAATTGGAGTTGCTGTTGGATCGTCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTGTGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGTGACTTCAGTCTTGCCAAAAGAACTCACTGCTGGTCCATTGCGTCGTGAGGAAGGAGAAGGTGCGAGGAAGACAAAGGCCTACGTAGAACTCACCGCGAGGAAGTTGTAG 1215 0.4 MDNKFSVSRENSANLRSPPPPPSNSFGGLLNATFGNATEMIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHQKVQVFNKSSHLTWPLQQAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLFFQLKSQQNSYSPVNEEVDTSENSDEEEEIELTQWEAIIWLAILTAWVSVLSGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLVSGFQSLFFILWILFNLLMGSISPQDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSVTSVLPKELTAGPLRREEGEGARKTKAYVELTARKL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi250g00019 404 FunFam Vacuolar cation/proton exchanger 24 173 - -
Sebi250g00019 404 Pfam Sodium/calcium exchanger protein 25 160 IPR004837 GO:0016020|GO:0055085
Sebi250g00019 404 Pfam Sodium/calcium exchanger protein 194 358 IPR004837 GO:0016020|GO:0055085
Sebi250g00019 404 Gene3D - 23 174 IPR044880 -
Sebi250g00019 404 Gene3D - 180 362 IPR044880 -
Sebi250g00019 404 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 25 366 IPR004713 GO:0006812|GO:0008324|GO:0016020
Sebi250g00019 404 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi250g00019 Sebi-Chr250 411299 421078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi250g00019 24 366 Antiporters AT1G55730 70.058 5.92e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi250g00019 K07300 - gmx:100806000 531.176