Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi250g00017 ATGCATACTTTGATGGATTCAAAAAGTGCAGTGTTGGTGGTGATCTTTGTTTGGATTTCAGTGTGTTCCCATGGTGCTGTTATCGTATCAAAGGATGGGAGTGGAGATTACACAAGTGTGGGTGAAGCTATTAACAAAGCACCAGATTTGAGTGACAAACCTTACACCATTCGCGTTCGAGCTGGTACTTATGAAGAATATGTCCTCATTCCCGCTGAGAAGACTAATATTAAGCTCATTGGAGATGATCCTCGCCACACAAAAATAGTTGGCTCTCAAAAAGGTTCCACCATAGACATTCGTGGAGAAGGATTCATGGCCAAAAACATAGGATTCATGAACTCAGCAGTGCTAAACGCAAGCGCAGCAGTGGCGGTTCGCAACGAGGCAAACAAGAGCATCTTCTTCCAATGCATCATTGAAGGCTTCCAAGACACGTTATGGGCTGTTTCGGGTCTTCAATTCTACAAAAACTGTGACATATACGGCACCGTTGATTTCATCTACGGCAACGCAGCAGCAGTTTTTCAAGACTGTAACATCTACGCGCGGTACCGAGAGTACGTGACTTTCACTGCTCAGTCACGTGAGGGTGCACATGAGAACACAGGGTTTACATTCCAAAGGTGCAAGTTCACCATGTCCCCTGAGGATTCAGATAGAAGATCAGAGGTTCATGCTACATTGGGGCGTCCCTGGAGGGCTTATTCTAGAGTGGCTATATTACAGTGTTACATTGATTCTATAGTGGATCCTCAAGGTTGGGAACAAATGTCTCACCAACCCACTGATAAGGTTACGTATGTGGAGTTTAGGAATGTTGGGCCTGGATCTAAAACTGATGGGAGGGTTAATTGGCCTGGTGTTAGACTCCTTCATTACCCAATTCAAGCAGTGCCTTTTACTGCTTCTCGTCTTTTGGATGCTGATTCGTGGATTCCCTCCAGGGGGGTTCCCTATGATAATGGACTATAA 975 0.4513 MHTLMDSKSAVLVVIFVWISVCSHGAVIVSKDGSGDYTSVGEAINKAPDLSDKPYTIRVRAGTYEEYVLIPAEKTNIKLIGDDPRHTKIVGSQKGSTIDIRGEGFMAKNIGFMNSAVLNASAAVAVRNEANKSIFFQCIIEGFQDTLWAVSGLQFYKNCDIYGTVDFIYGNAAAVFQDCNIYARYREYVTFTAQSREGAHENTGFTFQRCKFTMSPEDSDRRSEVHATLGRPWRAYSRVAILQCYIDSIVDPQGWEQMSHQPTDKVTYVEFRNVGPGSKTDGRVNWPGVRLLHYPIQAVPFTASRLLDADSWIPSRGVPYDNGL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi250g00017 324 Gene3D - 23 324 IPR012334 -
Sebi250g00017 324 FunFam Pectinesterase 24 320 - -
Sebi250g00017 324 PANTHER PECTINESTERASE 26 314 - -
Sebi250g00017 324 Pfam Pectinesterase 27 309 IPR000070 GO:0030599|GO:0042545
Sebi250g00017 324 SUPERFAMILY Pectin lyase-like 21 322 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi250g00017 Sebi-Chr250 388447 391049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi250g00017 26 324 Carbohydrate Esterase AT2G26440 40.064 1.89e-79 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi250g00017 K01051 - gmx:102665195 474.552