Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00101 ATGTACAGGTTCAAAGCGCATCCTTACTTTGCGCCTCGTGAAAGCGCAGAATCAGTTTGCAACTCCATTTTCCACTGTGTCCAAAACCACACCACCAGTGGGTGCCACTTCGCCATCTCATGCAACGCCAACCAGCAGGCTGAATACCTCTACAACTTTATTCAATCACGGAGGTCTCACAAGCCCTCACATGGAGAAGAACCTTCAAGTGCTGAATATGGTGTGGATGCATATGTTGTTGAGCAACAATCTTCATCAGGGTCGATGGAAGCTGACAAGGTGAAGGCTTTGCCAGGACAACCCCAAGGGGTTGATTTTGATCAATACGCTGGCTATGTAACTGTGGATGCCAAGGCAGGGAGAGCACTTTTCTACTACTTTGTGGAATCACCTCACAATTCTTCCACCAAACCTCTTGTTCTATGGCTAACTGGAGGGCCCGGGTGCTCTTCCCTGGGGTATGGGGCCATGCAAGAACTGGGACCTTTCAGAGTCAACAGTGATGGAAGAACACTTTACAGAAATGAATACGCATGGAACAACGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTAGGCTTTTCATATTCAAACACTCCTTCAGATTACTCTAAAACTGGTGACAATAGCACAGCCTTGGATTCTTACACTTTCCTTCTAAACTGGCTCCAAAGATTTCCACAATATAAAACTCGAGATTTGTTCATAACTGGAGAAAGTTATGCTGGCCATTATGTCCCTCAGTTAGCTGACATTATTCTCTCAAACAATAAGCTAATAAAAAACCACACAATGATCAATTTGAAGGGGATAGCGATTGGGAATGGGTGGATAGATGATGTTATGTGTACAAAGGGAATGTATGACTATTTCTGGACGCATGCTCTGAATTCTGATGAAACCCATGAAGGAATTGAAAAACACTGTGACTTTGAGAAGGGTAACTTTACAAGTGAATGCTACAAATATCAAAGTATAGCTGATGATGAAGTTGGAAGTCTTGACATATATAACGTGTATGCTCCACCTTGCGATTCAGCTGCAATAAAAACTGGTGCCACTCCCTCCACTTACTCTGCCACCAATTTCGACCCTTGTGCTGATGATTATACTAAGTCCTACTTAAATCTTGCTCAAGTTCAAGAGGCTTTCCATGCTAAAGCCTCAAAATGGTTTCCTTGCAGTGGAGTGGGATGGACTGATAGCCCTGCAACTATTCTACCCGCTATAAACCGGTTAATATCAAGTGGTATAAGCACCTGGATATACAGTGGTGATACAGATGGGCGTGTTCCTATAACCTCAACAAGGTATTCAATAAATACCTTAAAACTTCCAGTGGTTACAACATGGCGTCCATGGTACTCTGACAATGAGGTTGGAGGATATGTAGTTGGGTACAAAGGGCTCACATTCGTCACTGTAAGAGGAGCTGGCCACATGGTTCCAAGCTACCAACCACAGAGAGCATTAACAATGATCTCATTTTTCCTTCGTGGAGAACTCCCTCCTGAAACTTCCTCTTAA 1533 0.4364 MYRFKAHPYFAPRESAESVCNSIFHCVQNHTTSGCHFAISCNANQQAEYLYNFIQSRRSHKPSHGEEPSSAEYGVDAYVVEQQSSSGSMEADKVKALPGQPQGVDFDQYAGYVTVDAKAGRALFYYFVESPHNSSTKPLVLWLTGGPGCSSLGYGAMQELGPFRVNSDGRTLYRNEYAWNNVANVIFLESPAGVGFSYSNTPSDYSKTGDNSTALDSYTFLLNWLQRFPQYKTRDLFITGESYAGHYVPQLADIILSNNKLIKNHTMINLKGIAIGNGWIDDVMCTKGMYDYFWTHALNSDETHEGIEKHCDFEKGNFTSECYKYQSIADDEVGSLDIYNVYAPPCDSAAIKTGATPSTYSATNFDPCADDYTKSYLNLAQVQEAFHAKASKWFPCSGVGWTDSPATILPAINRLISSGISTWIYSGDTDGRVPITSTRYSINTLKLPVVTTWRPWYSDNEVGGYVVGYKGLTFVTVRGAGHMVPSYQPQRALTMISFFLRGELPPETSS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00101 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 472 485 IPR001563 GO:0004185|GO:0006508
Sebi24g00101 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 188 198 IPR001563 GO:0004185|GO:0006508
Sebi24g00101 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 224 249 IPR001563 GO:0004185|GO:0006508
Sebi24g00101 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 187 IPR001563 GO:0004185|GO:0006508
Sebi24g00101 510 ProSitePatterns Serine carboxypeptidases, histidine active site. 472 489 IPR033124 GO:0004185
Sebi24g00101 510 Gene3D - 408 502 - -
Sebi24g00101 510 FunFam Carboxypeptidase 408 502 - -
Sebi24g00101 510 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Sebi24g00101 510 FunFam Carboxypeptidase 88 348 - -
Sebi24g00101 510 SUPERFAMILY alpha/beta-Hydrolases 91 503 IPR029058 -
Sebi24g00101 510 Gene3D - 368 399 - -
Sebi24g00101 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 92 489 IPR001563 GO:0004185|GO:0006508
Sebi24g00101 510 ProSitePatterns Serine carboxypeptidases, serine active site. 238 245 IPR018202 GO:0004185
Sebi24g00101 510 Gene3D alpha/beta hydrolase 88 348 IPR029058 -
Sebi24g00101 510 Pfam Serine carboxypeptidase 98 501 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00101 Sebi-Chr24 3032472 3039085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00101 374 503 Calmodulin-binding Proteins AT2G22960 30.370 1.45e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00101 K16297 - gmx:100820473 811.986