Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00089 ATGATGGAAGACAGGGGTAATAGGGTTAATGAGGGTGAAGGTGAAGATGTAAATAACTTGAAATCCCCTAAAGAAGAAAATGTTTGTTTTGGTGAGGCTATTCCTGATGTGTACAAAAGGATTTCTGAGTTAACTGATGATGAAATTAGAATGCTTGAGTTTGATTCTGAACTGGATGCATATAATTTTTATTGTGAATATGCGAAATTCAAAGATTTTGCGGTTAGGAAAGATGATGTATATCGTGATCGTAATAGGTTTATTACTATGAGGCAATTGGTCTGTAACAGGCAGGGGGAAAGGAGTGAGAAACATTTAAATAGGAGGGATAGAATTAGGGAAGCTAAGGCCATTACTCGGACCAATTGTCTTGCAAGGCTTCGACTGTATTTAGATAATAATAGTGGTAAGTGGAGGGTTGGAATGTTTGAGTCACAACACAATCATGAGCTTACTCCTGCAAATATGGTTCATTTGATGCCTGCTTATCGTGGTTTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTCATATAATGGGGCTAATAATGGGTCAGAAAGGTGGTCACTCAGATTTGGGATTTTCTAAGTATGATAGTAATCCAATGTCATTTGTTAAGTTCACAACTACTGAAGATGATAGGCTTGAAAACTTGTTCTGGGCTGATGTAGTTGAATCATTTCTGGAAGCTATGTTCAATAAAGTACCTAAGGCAGTTGTTACTGATAGGGATGGTGCCATGCGTGAAGCTACAAGATCTGTGTTTCCAGGTTCTATCCACAGGCTGTGTTCATGGCATCTCCACCTAAATTCATGTGAGAATGTCAAGAATCCGAAATTTTTAGAAGATTTTAAGAAGTTAATTTATGCCAATTTTACTCCTGAGAAGTTTGAGCAAGAATGGGTACATGTTATTGAGAAACATGGTTTGAGCAACAATAGGCACAATGAATTAGCTTCTGATTTTAAATCTACATACACCCAGCCAGTTCTGACAACTGCCTTGGAAAAGTATGAAGTTCATGCTTGTAATATTGTGACAATGAAGATGAACAAATTTGGAAGTCCTAATTTTGTATACGTTGTTCTATTTGATAAGTCTGTTGGTGATACGACTAAAAAGGAAGTGTTGAGATCTGGTGCTGTGGGTGCTGCTTGTAATAGGCTTAACAAGGCTGCATATAAAAATCCTTATAACTTTGTGAAAAACATTGAGGCCATCCATCAATTAGCAGATCAAATGGAAAGGCAAGATGGAGTTGATGTGAACATTGCTGACATATCAAGGGTTGTCCGTGATCCAACCATTGTTAAAACTAAAGGTGCACCCTGTAAGAAAGAAGAGTCTTCAGTTGAGAGTGATGGAGAATCAAGAGATGTAATGGATACACATAATCATGATTCTTTAGCCCGTAGTAAAGGTGTAACTCTGTCTGGGCATGGGAAAAGTATAGCAAGACAGGGACCATTGATTTGTAAAAAATCTAATAAGAGGATGAAGCACAATGATGCTGTCAAATTAACTCAAGAGTTTGTAAATGATAGGCCACAACTAAATGATGTAACAAATGTTGAAATGAGGGACTGTTCAAGGTCAATGGATCATGTGAATCATATGAGTCATCAAAACATAGATGTAAATTATGGTTTTAGATTCATCCATAATGATCTCAGGTTCACTGGAACTTATCAATATCAGCCGTCAATGTTACCACACTTTGGTCATGCACAGTTTAGCAGCAGAGTACACATAATGCCCCAGTATCCTTCTATGCCAGTGCAACAAGCATTCCATAACACAACAATGTTCCATGAAATTAATACATTTGGTTCACATGATCCACAGCAATTGACTACAGGTGTAAATGAAGTTCAGAGGAAAACAGGTGTAGGCATCAGTTTCTTCAATCCAAGAGAAAACTGA 1950 0.3754 MMEDRGNRVNEGEGEDVNNLKSPKEENVCFGEAIPDVYKRISELTDDEIRMLEFDSELDAYNFYCEYAKFKDFAVRKDDVYRDRNRFITMRQLVCNRQGERSEKHLNRRDRIREAKAITRTNCLARLRLYLDNNSGKWRVGMFESQHNHELTPANMVHLMPAYRGLSAADKAQVNSLHLYGVRTCHIMGLIMGQKGGHSDLGFSKYDSNPMSFVKFTTTEDDRLENLFWADVVESFLEAMFNKVPKAVVTDRDGAMREATRSVFPGSIHRLCSWHLHLNSCENVKNPKFLEDFKKLIYANFTPEKFEQEWVHVIEKHGLSNNRHNELASDFKSTYTQPVLTTALEKYEVHACNIVTMKMNKFGSPNFVYVVLFDKSVGDTTKKEVLRSGAVGAACNRLNKAAYKNPYNFVKNIEAIHQLADQMERQDGVDVNIADISRVVRDPTIVKTKGAPCKKEESSVESDGESRDVMDTHNHDSLARSKGVTLSGHGKSIARQGPLICKKSNKRMKHNDAVKLTQEFVNDRPQLNDVTNVEMRDCSRSMDHVNHMSHQNIDVNYGFRFIHNDLRFTGTYQYQPSMLPHFGHAQFSSRVHIMPQYPSMPVQQAFHNTTMFHEINTFGSHDPQQLTTGVNEVQRKTGVGISFFNPREN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00089 649 MobiDBLite consensus disorder prediction 1 21 - -
Sebi24g00089 649 Pfam MULE transposase domain 229 277 IPR018289 -
Sebi24g00089 649 Pfam FAR1 DNA-binding domain 62 152 IPR004330 -
Sebi24g00089 649 MobiDBLite consensus disorder prediction 449 468 - -
Sebi24g00089 649 PANTHER OS01G0519700 PROTEIN 52 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00089 Sebi-Chr24 2760903 2764005 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi24g00089 FAR1 9.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00089 - - vvo:131613837 333.183