Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00073 ATGTCTGCAAAGAGTGAACACCAAACCGTTCCTCTTTCGGTGCTCCTGAGGCGTGAATTGGCAAATGAGAAAATTGAGAAACCTGAGATTGTTCATGGTCAAGCGTGCCAGAGCAAGAAAGGAGAGGATTTCACTCTGCTCAAGGCGGAGTGCCAGAGGATGGTGGGTGATGGGGTCTCTACATATTCCGTTTATGGGGCATTTTTCCTGGTTTCATTTTCTGATGTAGAAGTTTTACAGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGCGCGATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCCTTGCCTAGAGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGGTTTGCTACTAGCTCTGCTTGAAAGCAAAGCTATCATAATCTTGCATCTTGCCATAATTCTTTTGATTTTTAAAGATTTTGATTTACAAAAATCAGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGTGTACTTGAATCTGCTGAAGGTGGGATTTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAGAGGGTTCGCATCACCTCTAGTGGGGGTGAGGTTGGTAGGCTAAATACTGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTTTCACGATCTATTGGAGATATGGATATTGGTGAATTTATTGTCCCTGTACCATATGTAAAACAAGTGAAGCTTTCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTCTGGGATGCTCTACCTGCAGAAGTGGCCTTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTTCTGCACCACAAATTGTTAAAGAAGCCGTACAAGCAAAGGGACTTAGAGATGATACAACCTGTATCGTTGTTGATATATTACCTCAGGAGAAGCCAACTGCTTCTGTGCCACACCAGAAGAAGCCAGTAAAAGGAATGCTTAAGTCCATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTATATTGACAAAGAATACTTGGAGCCAGATGTAGTGGCGGAACTGTATGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACTAAATATCCACTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTATGTCAAGTGGAGATAAAACCTGGAGAGGGTATTTCAATACATGAGGGTGCCCCCAACCCTCAAAAATTGCGTCCCTGGGACGGGCCTTTCCTTTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAAATCAACAGATAGACTTAGCAGCGGAAGTGACGAATGA 1413 0.4317 MSAKSEHQTVPLSVLLRRELANEKIEKPEIVHGQACQSKKGEDFTLLKAECQRMVGDGVSTYSVYGAFFLVSFSDVEVLQLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQEKGLLLALLESKAIIILHLAIILLIFKDFDLQKSGTTVTFVIIEGWVVTVASVGDSRCVLESAEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVAFDCCRGMSAEASAPQIVKEAVQAKGLRDDTTCIVVDILPQEKPTASVPHQKKPVKGMLKSMFRKKSSESSSYIDKEYLEPDVVAELYEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGISIHEGAPNPQKLRPWDGPFLCSSCQEKKEAMEGKKSTDRLSSGSDE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00073 470 Gene3D - 59 343 IPR036457 -
Sebi24g00073 470 ProSiteProfiles PPM-type phosphatase domain profile. 58 335 IPR001932 -
Sebi24g00073 470 Pfam Protein phosphatase 2C 75 324 IPR001932 -
Sebi24g00073 470 MobiDBLite consensus disorder prediction 451 470 - -
Sebi24g00073 470 CDD PP2Cc 81 335 IPR001932 -
Sebi24g00073 470 PANTHER PROTEIN PHOSPHATASE 35 334 IPR015655 GO:0004722|GO:0006470
Sebi24g00073 470 FunFam probable protein phosphatase 2C 12 32 341 - -
Sebi24g00073 470 SUPERFAMILY PP2C-like 72 335 IPR036457 -
Sebi24g00073 470 SMART PP2C_4 21 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00073 Sebi-Chr24 2543454 2547648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00073 1 469 PP2C-type Phosphatase Gene Family AT1G47380 72.979 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00073 - - gmx:100778367 759.599