Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00041 ATGGCTGGCTCTGGTACGCACCACCCAACAACACAACCATCTTCATCTTTTGCCAGAGCCATGCCTCCTGATTCCGAAGAGTTCTCCACCTTGTTCAACCAACTCCTCCACAATAACTCTCCCCCACCACCAATGGATCCGAACCATTCCGAGTCGGACTTCACCTCGACCCACCCGGTTGCTCCTTCTCCTTCTACTTTCAATTTCTCTGATCCTTATGCTGATGCTTCCATCCCTGACCCTCATGCCAGCACATCCTTCAAACAACACACCCTTGAGGATAATGCTGAGACTTCAGAGTTGCCATCAAAGTCTGCCCCACCACCACGTTCTTCGTCAAAAAGGAGCAGAGCTGCAGAGTTCCATAATTTGTCTGAAAAGACAGACAAAGCTTCAATGCTAGATGAGGCCATAGAATACTTAAAGCAGCTTCAGCTTCAAGTGCAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGCCTTTATCAGGAGGAATGCGACCTATGATGTTGCCTCAGGCTGGGTTGAATCTTGATGAGGGTAATGGATTTCAGAATTCTATCAGTGCAATTGCATCATCTGCAAATGATCATGAAAGTTTGGTGAGGCCTGCTTTTAGTTTTCCAGAGCAATGTAGCATCTCAAATCAATCTCTTGTCATGCCATCAGTGACAAATATAGCTACTTTGGATACCCCATCCAATTTTCAACCCTCTATTAAGGATGCACTCTGCGGCAACATGCCAAAACTGTTTTTGGATACACCAAAGATTGGAAAAAACCCCTTCTCCAGATGTTTCTTAAAAGCTTGA 819 0.4493 MAGSGTHHPTTQPSSSFARAMPPDSEEFSTLFNQLLHNNSPPPPMDPNHSESDFTSTHPVAPSPSTFNFSDPYADASIPDPHASTSFKQHTLEDNAETSELPSKSAPPPRSSSKRSRAAEFHNLSEKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMPLSGGMRPMMLPQAGLNLDEGNGFQNSISAIASSANDHESLVRPAFSFPEQCSISNQSLVMPSVTNIATLDTPSNFQPSIKDALCGNMPKLFLDTPKIGKNPFSRCFLKA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00041 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 163 IPR036638 GO:0046983
Sebi24g00041 272 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 125 242 IPR031066 -
Sebi24g00041 272 Gene3D - 78 160 IPR036638 GO:0046983
Sebi24g00041 272 MobiDBLite consensus disorder prediction 1 125 - -
Sebi24g00041 272 MobiDBLite consensus disorder prediction 49 72 - -
Sebi24g00041 272 MobiDBLite consensus disorder prediction 1 19 - -
Sebi24g00041 272 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00041 Sebi-Chr24 1564097 1566270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00041 22 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67110 40.268 1.52e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00041 - - gmx:100785332 276.559