Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00036 ATGAGGCCTGTTGCAATTGCACCTAATGTTGCACCCCGAATGCCACTCTACCCTCCTGGTGCTCCCGGTCTAGGACACAATTTTTGCTGGATTTGGTTACCAGCAGCAACTCGTTCCTGGGATGAGGCCTGGTGGTGCTCCACTGCCAAGCTTCTTTGTACCAATGGTTCAGCAGCCAACAAGGCCAGCGCCCAGCAGGACGCCGAGGCAGGTCCTGTACAACAACCCCAGCAGCCAGTGCCATTGATGCAGCAGCAGGGGACGTGTCTATCGCTACCCTCCTGGACGCAACATGCAAGATGTCCCACTGCCAGGGTAGCTGGAGGAATGCTCTCAGTCCCTTATGACATGGGTGGTCTGCCAATCCGGGATGCTGTGGGACAGCCAATGCCTATTCAGGCTTTGGCTACAGCCCTTGCAAATGCTCCTCCTGAACAACAGAGGACTATGCTTGGTGAAGCTTTATACCCGCTAGTAGATCAACTGGAACATGATGCAGCAGCTAAGGTTACAGGCATGCTTTTGGAGATGGACCAGCCTGAGCCAGCCCCAGCTGATCAACTTGCCTCACTCTCCCTTAATGACAGTCTTGTGTCTTAG 600 0.5433 MRPVAIAPNVAPRMPLYPPGAPGLGHNFCWIWLPAATRSWDEAWWCSTAKLLCTNGSAANKASAQQDAEAGPVQQPQQPVPLMQQQGTCLSLPSWTQHARCPTARVAGGMLSVPYDMGGLPIRDAVGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEMDQPEPAPADQLASLSLNDSLVS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00036 199 SUPERFAMILY PABC (PABP) domain 85 182 IPR036053 GO:0003723
Sebi24g00036 199 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 131 199 IPR002004 GO:0003723
Sebi24g00036 199 SMART poly_2 143 196 IPR002004 GO:0003723
Sebi24g00036 199 Pfam Poly-adenylate binding protein, unique domain 139 181 IPR002004 GO:0003723
Sebi24g00036 199 Gene3D - 127 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00036 Sebi-Chr24 1465377 1466669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00036 1 197 Eukaryotic Initiation Factors Gene Family AT2G23350 35.573 5.35e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00036 K13126 - gmx:100784442 207.223