Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00031 ATGAAGGTGCATCAGTTCACACGTGGATTTTGGGAGCACGAACCCTCCCTCTCACTTGGGTGCAAGCGGTTACGCCCTCTCGCCCCCAAACTTTCTAATGACACCACCGAAATTACCACTGCTTCACCCACTCCTACTACTACTACACCTTTCGACCTCAAAAGCTTCATTCGACCCGAAAGGGGGACACGGTGGAATCCGACGCAAGAGCAGATAGGGATATTGGAGATGCTGTATAGAGGTGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACGGTTCAACTTGGCAAGTATGGCAAAATTGAAGGGAAGAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAATAGTCTTGGCCTTGCTCATAGTCCTCGAACTCCCACCACAGTCTCATCCACTTTTGCTAGTACTATAACAACTTTGGAGACCCCCAAAAAGGGAGAAGTAGTTGAAAGGGATCAGGAAGATAGCCCATTCAAGAAGTGTAGGAGCTGGGCGTTTGAGTATTTGGAAGACCAAAGTTGGTCATTGTGCAAAGAAGAAGAACAAAAAAACTCTGGAGCTTTTCCATTGCACCCGGAAGGCAGATGA 624 0.476 MKVHQFTRGFWEHEPSLSLGCKRLRPLAPKLSNDTTEITTASPTPTTTTPFDLKSFIRPERGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPTTVSSTFASTITTLETPKKGEVVERDQEDSPFKKCRSWAFEYLEDQSWSLCKEEEQKNSGAFPLHPEGR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00031 207 Gene3D - 61 129 - -
Sebi24g00031 207 MobiDBLite consensus disorder prediction 121 143 - -
Sebi24g00031 207 FunFam WUSCHEL-related homeobox 4 62 129 - -
Sebi24g00031 207 MobiDBLite consensus disorder prediction 128 143 - -
Sebi24g00031 207 Pfam Homeodomain 61 122 IPR001356 GO:0003677
Sebi24g00031 207 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 62 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Sebi24g00031 207 SMART HOX_1 60 127 IPR001356 GO:0003677
Sebi24g00031 207 SUPERFAMILY Homeodomain-like 57 128 IPR009057 -
Sebi24g00031 207 ProSiteProfiles 'Homeobox' domain profile. 58 123 IPR001356 GO:0003677
Sebi24g00031 207 CDD homeodomain 61 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00031 Sebi-Chr24 1345017 1346042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00031 1 150 Wox Gene Family AT1G46480 58.192 3.11e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sebi24g00031 Homeodomain 5.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00031 - - aprc:113848075 325.479