Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00019 ATGGAACTGAGCTTGGATTTGAGTTTGGCTTTTGTCCCCAAAACCGTTTCCCTCTTTCTTGGCGACGTTTCTCGGAGCAGAGAAAACTCTGAGAAACTTGCCATTCTTGAGGACTTTATCCAGAGATTGGAGGATGAGATGAGGAAGGTTGAGGCTTTCAAACGCGAGCTCCCTCTTTGCATGCTCCTTGTAAACGATGGTGCGGTGCTTCTCTATCTTCTCTACGCCATAACAAGATTGAAGGAGGAAAAACTACGGTGTATTGGAATGCAAGATCCACCTGTAACTGAGGAAGAATTCATGCCGCTGAAGACCAATTATGGAGGAAATGGAAAAGGACCTTCAACCATGGGAAAAGAAAGCTGTGACAAGAAGAATTGGATGAGCTCAGTTCAGCTATGGAACACTGATGAAACAAATTGGGTGGAGAAAGTGTTCAACAACCGGATCAGAAGAACAATAGTGGAGGAGCATTTATCTCATTTGTCCCCAAAGAGGGTACGTAGTAGTTCTGGCGCTTCTTTGCTTCACGTTGAGATACAAAGTCAACCACAACCACCGCAACATCTGCAGCAGAATCCAAGGAAACAAAGGCGATGCTGGTCATCGGAGCTTCATCGGCGTTTTGTTGACGCGCTTCAACAACTTGGTGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTGATGCAGGTGGAAGGCCTCACAAATGATGAAGTGAAAAGCCACTTGCAAAAGTACAGGCTTCATATTAGAAGATTCCCAACTGACCAGACTAATAATGGCTTATGGATGGCACAAGATCAATGTGGAGATAAATCAAAGGGGAACCTATCACAGTCTGGTTCCCCACAAGGTCCTCTTACACCTCTTGTCTTGGGAGGGTCTGTTAAGGGTCCTCTTACTATAGGCATCGAGTATTTCTTATAA 933 0.4512 MELSLDLSLAFVPKTVSLFLGDVSRSRENSEKLAILEDFIQRLEDEMRKVEAFKRELPLCMLLVNDGAVLLYLLYAITRLKEEKLRCIGMQDPPVTEEEFMPLKTNYGGNGKGPSTMGKESCDKKNWMSSVQLWNTDETNWVEKVFNNRIRRTIVEEHLSHLSPKRVRSSSGASLLHVEIQSQPQPPQHLQQNPRKQRRCWSSELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHIRRFPTDQTNNGLWMAQDQCGDKSKGNLSQSGSPQGPLTPLVLGGSVKGPLTIGIEYFL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00019 310 MobiDBLite consensus disorder prediction 101 122 - -
Sebi24g00019 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 291 IPR044787 GO:0003700|GO:0006355
Sebi24g00019 310 SUPERFAMILY Homeodomain-like 194 254 IPR009057 -
Sebi24g00019 310 MobiDBLite consensus disorder prediction 267 288 - -
Sebi24g00019 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 196 251 IPR006447 GO:0003677
Sebi24g00019 310 Gene3D - 195 252 - -
Sebi24g00019 310 FunFam Myb family transcription factor 195 253 - -
Sebi24g00019 310 MobiDBLite consensus disorder prediction 267 292 - -
Sebi24g00019 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 253 IPR017930 -
Sebi24g00019 310 Pfam Myb-like DNA-binding domain 198 249 IPR001005 -
Sebi24g00019 310 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00019 Sebi-Chr24 834024 835568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00019 1 263 G2-like Transcription Factor Family AT2G03500 37.931 5.67e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi24g00019 Myb_DNA-binding 7.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00019 - - pvu:PHAVU_002G021400g 362.844