Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00017 ATGAGTACCATCCTCGGAAAATTGTTGGTCTCAACTTTGTACATCCTCTTCCTGTCCCTTCCTCTCCACACGTCAGCACATGACATTAAAACAGATACACTAAATTTCATCAATGCCCGCAGTGGCCACAAGAACAAAGGTGGTGGAGATGGTAGCTCAAGCAAAGGCTGCAACAACAACAACCAATTGAACAAAATACCATGTAAAAAATCAAACCCCATTCAAGCAGCTGCAGCTCCATCTTTACCTGTCAAAACAGATTCCCTGGTTTTTACTGATCAAAGACTTGAAGTAGTTTACCCAGTGATTCAAAATTTCAAGTCTATCATCACTTCAGATCCCTTAGGTGTTACCAAATCTTGGGTAGGTTCTGATATATGCAGTTATAAAGGATTCTACTGTGATAATCCTCCAGATAACAGCTCTGCTATTGCTCTGGCTTCTGTTGACTTCAATGGTTTCCAACTTGCTGCTTCTACTCTTGATGGCTTTATTGATAAGCTTCCTGATATTGCTCTTTTCCATGCAAATTCCAACAATTTTTCTGGCACAATCTCACCCCAAATTGCCAAGCTACCTTATCTCTATGAGCTTGATGTAAGCAACAATCAATTGTCTGGTCCATTTCCCATGGCTGTTCTAGGCATGGACACATTAACTTTCTTGGATATTAGGTTCAATTTCTTCTCTGGGGCAGTCCCACCTCAGATATTCATCCAGAACCTTGAAGCCCTCTTTATCAATGACAATATCTTCACTCAGGGTTTACCTGATAATTTAGGCAACACTCATATTCTCTTACTCACCTTAGCAAACAACAAATTCAATGGTCCAATACCTAGAAGCCTTCCAAAAGCTTTGTCCACTCTCACTGAGGTTCTGTTACTCAACAACCAGCTAACAGGTTGCTTGCCTTATGAGATTGGGTATCTTCAAGAGGCTACAGTGTTTGATGCTGGAAACAACCAGCTGACAGGTCCTTTACCATTCTCTTTGAGTTGTCTTGAGAAGGTGGAGCTGCTCAATTTGGCTGGTAACTTGCTGTATGGTATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTTACTCATGTGGGACCATTGTGTAGGATCTTAATTCAGAGAGGAGTTCTTGATGTTAGAAACAACTGTATCCCTGATCTTCCATTCCAGAGATCAGTGTTTGAGTGTGCAACTTTCTTTTCACACCCAAGGATGTGTCCCTTCATGTGGGCTCATAGTTTCATCCCTTGTAAGCTTCCTTTTCAAAACACCCCAGTTTCTTCGATTCCTTAG 1329 0.4138 MSTILGKLLVSTLYILFLSLPLHTSAHDIKTDTLNFINARSGHKNKGGGDGSSSKGCNNNNQLNKIPCKKSNPIQAAAAPSLPVKTDSLVFTDQRLEVVYPVIQNFKSIITSDPLGVTKSWVGSDICSYKGFYCDNPPDNSSAIALASVDFNGFQLAASTLDGFIDKLPDIALFHANSNNFSGTISPQIAKLPYLYELDVSNNQLSGPFPMAVLGMDTLTFLDIRFNFFSGAVPPQIFIQNLEALFINDNIFTQGLPDNLGNTHILLLTLANNKFNGPIPRSLPKALSTLTEVLLLNNQLTGCLPYEIGYLQEATVFDAGNNQLTGPLPFSLSCLEKVELLNLAGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPLCRILIQRGVLDVRNNCIPDLPFQRSVFECATFFSHPRMCPFMWAHSFIPCKLPFQNTPVSSIP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00017 442 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 430 - -
Sebi24g00017 442 Gene3D Ribonuclease Inhibitor 101 405 IPR032675 -
Sebi24g00017 442 SUPERFAMILY L domain-like 102 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00017 Sebi-Chr24 774759 776087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00017 88 415 Leucine-rich Repeat extension Gene Families AT3G24480 43.598 1.37e-85 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00017 - - gmx:100789584 689.878