Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00016 ATGGCTGTGGAGCTTATAACGGGTTATCGTGGTGATAGCTTTGCAACAAGAAGTAGTGTGAGGGATGACAATGCCATTGCCGTACAAGAAGCAGCTTCTGCTGGTATTCATAGCGTGGAGAAGCTCATGAACATGATTTCAGAACAGAATAAGCAGAAGAATAATAATGAAGATGGTTCTTCTTCTGAATTTGAAGCTGTTGCTGATGTGGCTGTGAATAGATTCAAAGAGGTTTATTGCCCTACACCGGTTCTACGTCCCCCTCCTTTTCCGCTACCTCAGCAGCCAGAGAAGAATGAAGCAAATGGTTCTATCAAATTTTCAGCTTCACCATCAGTTTCTGCTGCTAACTCCTATATCTCTACGCTAACAGGGGACAGTGAAAGTTTGCAACAACGACCCTGTCGTTCTTCAGGGTTCCAAATCACTCACGTTTCTTCTTTTATGCGTAAACCACCACTATCTTCAACTTCTATGAAGAGGAAGTGCAATTCCATGGACTTTCCTGCTATCAAGTGTGGATCATCCTCTGCCCAGTGCCATTGCTCTAAGAAAAGGAAATTGAAGTTGAAGAGAGTGATTAGAGTGCCAGCTATTAGTTCTAAAACTGCTGATATCCCACCTGATGAGTATTCATGGAGAAAATATGGACAGAAACCCATTAAGGGCTCTCCTCATCCAAGGGGTTATTACAAGTGCACTAGCGTGAGAGGCTGTCCAGCACGCAAACACGTGGAGCGCGCTGTGGATGATTCTAACATGCTTATTGTCACCTACGAAGGAGATCATAATCACACAAACACTGCTTCTGAGGTGGCTAATGCTGTTGTCGTTGAATCATCTTGA 846 0.4385 MAVELITGYRGDSFATRSSVRDDNAIAVQEAASAGIHSVEKLMNMISEQNKQKNNNEDGSSSEFEAVADVAVNRFKEVYCPTPVLRPPPFPLPQQPEKNEANGSIKFSASPSVSAANSYISTLTGDSESLQQRPCRSSGFQITHVSSFMRKPPLSSTSMKRKCNSMDFPAIKCGSSSAQCHCSKKRKLKLKRVIRVPAISSKTADIPPDEYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDSNMLIVTYEGDHNHTNTASEVANAVVVESS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00016 281 Gene3D WRKY domain 192 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi24g00016 281 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi24g00016 281 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 28 272 IPR044810 GO:0003700
Sebi24g00016 281 FunFam WRKY transcription factor 65 191 268 - -
Sebi24g00016 281 Pfam Plant zinc cluster domain 160 205 IPR018872 -
Sebi24g00016 281 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi24g00016 281 Pfam WRKY DNA -binding domain 209 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi24g00016 281 SUPERFAMILY WRKY DNA-binding domain 203 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00016 Sebi-Chr24 744262 745777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00016 23 265 WRKY Transcription Factor Family AT2G24570 38.158 2.79e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi24g00016 WRKY 6.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi24g00016 - - lja:Lj0g3v0162929.1 313.923