Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi24g00006 ATGGCGTCTGCAAGCAAAGACATGGATCGGATCAAGGGTCCTTGGAGCCCTGAAGAAGATGATGCGTTACAGAGGCTGGTTCAAATACACGGGCCGAGGAACTGGTCTTTGATCAGCAAATCCATTCCTGGTCGATCTGGGAAGTCGTGCCGTCTGCGGTGGTGCAACCAGCTGTCACCGCAGGTGGAGCACCGGCCATTCACGGCGGAGGAGGACAGCGCTATCATCAGAGCGCATGCCAGGTTCGGCAACAAATGGGCTACAATAGCTCGTGTTCTTAACGGTCGTACAGATAACGCCGTTAAGAATCACTGGAATTCCACCCTCAAGAGAAAATGCTCTGCCGTCACCGTCACAGCCGATCCCGACTCGTGTGATTACCAACCTCTCAAAAGATCCGCCAGTGTCGGTGCGGGTTATTTGAACCCGAGTAGCCCATCTGGATCCGATTTGAGCGATCCGGGTTTGCCCGCTATGTCCACTCCTTCAGCACATGCTAATGTTTTCAAACCCATTGCGAGGAGCGCAACGGTGATTCCCTCAACACACCTAATCGAAACTGCATCTTCAGACACCGATCCACCCACGTCGCTCACCTTATCGCTTCCCGGCGAGGAACGAGGGAAGCAGTTGTTCAACGCGGAGTTCTTAGCGGTGATGCAAGAAATGATAAGGAAGGAAGTGAGGAAATACATGTCTGGGATTGACCAGAATGGACTGTGTATGCAGACTGAAGCCATTGGAAACGCTGTGGTGAAACGCATGGGAATTAGCAACGTGAAGTAG 786 0.5254 MASASKDMDRIKGPWSPEEDDALQRLVQIHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTAEEDSAIIRAHARFGNKWATIARVLNGRTDNAVKNHWNSTLKRKCSAVTVTADPDSCDYQPLKRSASVGAGYLNPSSPSGSDLSDPGLPAMSTPSAHANVFKPIARSATVIPSTHLIETASSDTDPPTSLTLSLPGEERGKQLFNAEFLAVMQEMIRKEVRKYMSGIDQNGLCMQTEAIGNAVVKRMGISNVK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi24g00006 261 FunFam Transcription factor MYB44 66 112 - -
Sebi24g00006 261 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Sebi24g00006 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Sebi24g00006 261 Gene3D - 65 128 - -
Sebi24g00006 261 Gene3D - 11 63 - -
Sebi24g00006 261 CDD SANT 14 56 IPR001005 -
Sebi24g00006 261 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Sebi24g00006 261 MobiDBLite consensus disorder prediction 137 159 - -
Sebi24g00006 261 PANTHER MYB PROTEIN-RELATED 12 169 - -
Sebi24g00006 261 Pfam Myb-like DNA-binding domain 15 73 - -
Sebi24g00006 261 FunFam MYB transcription factor 12 63 - -
Sebi24g00006 261 CDD SANT 66 109 IPR001005 -
Sebi24g00006 261 SMART sant 63 111 IPR001005 -
Sebi24g00006 261 SMART sant 11 60 IPR001005 -
Sebi24g00006 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Sebi24g00006 261 MobiDBLite consensus disorder prediction 138 156 - -
Sebi24g00006 261 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi24g00006 Sebi-Chr24 284234 285142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi24g00006 6 237 MYB Transcription Factor Family AT4G37260 51.370 1.73e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi24g00006 Myb_DNA-bind_6 7.4e-17 CL0123