Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00122 ATGGGATCCAAGGACAGCAATGACGCCATGGTGGCAGTTCAATTGACTGTTGATTTGAAGCATGATTTGCCAAGAGAAGCAGAAAGAATTAAGCGTTGCAAGGGTAGGGTATTTGCACTGCAAGATGAGCCAGAAGTGCCTAGGGTATGGTTGCCTTTTGATGATGCTCCAGGATTAGCAACGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGACAGAGATTGA 273 0.4505 MGSKDSNDAMVAVQLTVDLKHDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLATARAFGDFCLKEYGVISIPEFSHRLLTDRD 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00122 90 Pfam Protein phosphatase 2C 9 89 IPR001932 -
Sebi249g00122 90 ProSiteProfiles PPM-type phosphatase domain profile. 1 90 IPR001932 -
Sebi249g00122 90 Gene3D - 1 90 IPR036457 -
Sebi249g00122 90 SUPERFAMILY PP2C-like 11 88 IPR036457 -
Sebi249g00122 90 PANTHER PROTEIN PHOSPHATASE 8 90 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00122 Sebi-Chr249 1387142 1387507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00122 1 90 PP2C-type Phosphatase Gene Family AT1G03590 88.889 3.28e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00122 - - cit:102615376 179.489