Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00118 ATGCCTCAGGGAAGCCTTGAAGTTTTTCTTGTCAATGCCAAGGGCCTTGAGAATACCGATTATCTTTGTAACATGGATCCTTATGTGATCCTCATGTGTCGCACTCAGGAGCAAAAAAGCAGTGTTGCGTCAGGTAAAGGAAGTGATCCAGAGTGGAATGAGAATTTTGTATTCAACGTGTCAGAAGGCGTTTCTGAACTCAAATTGAAGATCATGGACAGTGATAGCGGAACGGCTGATGATCTCGTTGGAGAAGCTACCATTTCACTAGACGCATTGTTTATCGAAGGAAGCATCCCACCCACAGCATACAATGTTGTCAAGGATGGCCACTACTGTGGAGAAATTAGAATGGGCCTCACTTTTAAGCGTGAGGACCGCAGCGAACGGCAACTGGAACTGGAAAGTTTTGGTGGGTGGAAGGAGTCTGCACGTTACTGA 441 0.4603 MPQGSLEVFLVNAKGLENTDYLCNMDPYVILMCRTQEQKSSVASGKGSDPEWNENFVFNVSEGVSELKLKIMDSDSGTADDLVGEATISLDALFIEGSIPPTAYNVVKDGHYCGEIRMGLTFKREDRSERQLELESFGGWKESARY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00118 146 PANTHER C2 DOMAIN-CONTAINING 1 126 - -
Sebi249g00118 146 SMART C2_3c 5 102 IPR000008 -
Sebi249g00118 146 Gene3D C2 domain 2 124 IPR035892 -
Sebi249g00118 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Sebi249g00118 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 123 IPR035892 -
Sebi249g00118 146 Pfam C2 domain 4 93 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00118 Sebi-Chr249 1367073 1368353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00118 4 128 C2H2 Transcription Factor Family AT4G21160 28.000 2.98e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00118 - - gmx:100782974 253.062