Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00091 ATGATCATTCCGGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTATGCTACGCAAAGAAGGATTATAATTTAGCAAAGCACCCAGATATCGATGTGCCAAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCTAGGGAGTACGTTAGAGAGACCTTTGCTTGGATGAACTACTATTGGTTCCTCACAAACGAAGGCATTGAATTCCTCAGAGGATACCTTAATCTTCCTTCTGAAATTGTTCCTGCTACTTTGAAGAAACAAGCCAAGCCCCCCGGTAGATCATTCGGTGGTCCCGGTGATCGCCCTAGGGGTCCACCACGCTTTGACGGAGAACGTAGATTTGGTGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGACAGGGTGGTGACTTTGGAGGAGACAAGGGAGGAGCTCCTGCTGACTACAGACCCTCCTTTGGGGGTCCTGGCGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGGGCTCCAACCAGCTCAAATCTTCCCTAA 540 0.5019 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNEGIEFLRGYLNLPSEIVPATLKKQAKPPGRSFGGPGDRPRGPPRFDGERRFGGDRDGYRGGPRGQGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNLP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00091 179 MobiDBLite consensus disorder prediction 111 127 - -
Sebi249g00091 179 MobiDBLite consensus disorder prediction 91 179 - -
Sebi249g00091 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Sebi249g00091 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Sebi249g00091 179 Gene3D - 1 103 IPR036388 -
Sebi249g00091 179 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00091 Sebi-Chr249 1060310 1061936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00091 1 179 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 71.111 9.89e-73 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00091 K02947 K09422 gmx:100500445 220.705