Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00089 ATGCAGTGGGAACAGGAGGGAGGGGGAAAAGGGGGAACTGGCAACTTAAATGGGTTTCCTTGGGTAGGTGTGAACCAAAGAGAAGCTTTAGGAGGCATACATGAAGGCAGCCAGCTTGCATCTCTGGTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAATTTGCCTCTAGAAACTTCAGAGGAGGAATTGAGGGCATGGTTGAGGGATGGATCTGTATTATGCAGCATTTTTGACAAGCTGGTTCCTGGTTCAGTGGAGGGAAGTGGTTATTTGAATGGACCAGTCAGTGTTAAAAGGTTTCTGGCAGCTTTGGATGAATTGGGATTGCCAGGATTTGAATTTTCAGACCTGGAGCAGGGATCCATGGTGCCTGTGTTGCAGTGCCTTGAGACTCTGAAATATCATTTTGCTTACAATGCTGCACGAGAAAATGTCCAAAGTTGTACCAGAAAGAGGTGGGACCAGTCGAATATAACATCCCTAGAGGAAACTGATTATTGCTTCAAGGATGCTTCAAAATTCCAACATGCTGTTGATGGTTCTGTTGTATCAGATGAAATTGCTTCTATAGATCATATTGGATTGAAGTCTAATGAACTGTTCCAGTTGAAGCGAGGATTGCACATGGATCTTTCAGATGCTAAACTTAGTGAATTATTAAAATCAAACAATTTGGATAATGTCTCAACTCAATTGCTTTTTAACATAGGAAACGGGATCCTAAGTGAGATCTTTGAAAGGAAGAATGGAGATGTCCCTCAAGGTCAGCGTGCAGCATGCTTATTGAGGAAAATATTGCAAGTAATTGAATTGCGCTTTTCAAATCAAGCAGAGAGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAAACAAGAATAAATGCACTTGAAACCCTGGCGGTAGGAACAACTGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAGTTGAAGTTTGCTTTGCAGCTTGAACAAGCTAAATTTGAGGAGAAGAAGAAACTTGAAGAGGAGGATTTTTCTCGATTAAAGAAAGACAGAGTTCGTGATGAAATTGAAATTTCTGAATTGAAGCAAGATTTAGAAATGGCCAAAAGAGCACATGAAGAACATGTTTCACAGTTAGAACTACAAGCTACTGAATCTAAAGCTGAATATGAGAAGAGGATAGGGGAACTTAAGCGTCATCTTGCTGATTCAAGGAAGCAAGTGAAGGAGCTGGAGGCATTTTCAGAATCCAGATCTTTGAATTGGAAGAATAAAGAGCATACCTATCGGAGTTTTGTAAATGACCAATTTAAGGCTTTCCAGGAATTGAGAGCTTCAATGAAGTCTGTAAAAAATGAGGTGATAAAAACAAAAAGAAGCTACTTGGAGGAATTCAAGTACTTTGGAATCAAGCTCAAAGGTTTAGCTGAGGCTGCCGAAAATTATCATGTAGTTCTAACAGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATAAGGGTATATTGTCGAATTAGACCATTTCTTTCGGGGCAAAGTCAAAGTCATACAACAATTGAGTTTGTTGGTGATGATGGAGAACTAGTTGTTAGCAATCCTCTCAAACAAGGAAAAGAAAATCGCAGGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCAGCAAGTCAAGAGGAAGTATTCATAGACACTCAACCACTAATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAGACTGGCTCAGGAAAGACGTATACAATGAGTGGACCTAGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGACCTTTTCCATATCTCCCAAAATGTTCTCGAGTTAATGAATACTGGGTTGATGAATCGGGCAACTAGTGCCACAGCCTTAAATGAAAGAAGTAGTAGATCACACAGTGTTCTCTCTGTACATGTTCGAGGAACTGAGTTGAAGACCAAAACACTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACCGGAGATAGGCTCAAGGAGGCTCAGCATATAAACAAATCATTATCCGCACTTGGAGATGTGATATCTGCTCTAGCTCAAAAGAGTTCTCATGTGCCGTATAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCATTAGGTGGTCAAGCGAAAACCCTAATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCTGAAACTATAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGTGTTGAGTTAGGAGCGGCTCGCAGCAACAGAGAGGGAAGGGACGTGAGAGAACTTATGGAGCAGTTAGCATCTCTCAAGGATGCAATTGCAAGAAAAGACGAAGAGAATGAGCGATTGCAGTCCCTCAAGGCTAATCACAATGGTTCAAAGCTTGGTATAGTCTCACTAAGGCATGAGTCATCATCTCCAAGGAGACATTCCATAGGGACACCTCGAAATAGCATGAGACGTCAAGGAGCAAAGAGTTTTGGAGTCAATGATAAAGCAGCTTCTGACATGGATAACTGCTCAGAGTATAGTGATAAGAATTCAGAAGCTGGTTCTCATCAGTCAATGGATGATTTCAGGAATAAGTCCAGTTCCCTACGGTTGAAATTAGCTAGAGAAGATATCAATCAAAATCTCAATGAGGACATGGAACTCTTAAAATTTGGAGATGCGGATTCAGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAACTTGAGAAGGCAGCTGAAACTACACCAGCTAAGGAGAGAACAGCTGACAACCTTCTAGCTGAGAGCACAGAAAAGCCCATTATGCCATCCAAAATTCCTAAAGCTCCGCAAGTGCAGCAAGTGCAGCCAAAATTGCAGACAAGAACTTCTAGGCTATCATTGAACAGAAGCTCCTCGAAGGCTTTGTCAAGTGTTAGAAAACCCACAGGCGGTAGCTCTTCTTCGGTGAAGCCTGTCAAACGATGGCAATAG 3108 0.4096 MQWEQEGGGKGGTGNLNGFPWVGVNQREALGGIHEGSQLASLVKWINAVLPNFNLPLETSEEELRAWLRDGSVLCSIFDKLVPGSVEGSGYLNGPVSVKRFLAALDELGLPGFEFSDLEQGSMVPVLQCLETLKYHFAYNAARENVQSCTRKRWDQSNITSLEETDYCFKDASKFQHAVDGSVVSDEIASIDHIGLKSNELFQLKRGLHMDLSDAKLSELLKSNNLDNVSTQLLFNIGNGILSEIFERKNGDVPQGQRAACLLRKILQVIELRFSNQAESMKNQNNLFKAREGKYQTRINALETLAVGTTEENEVVTGWVQQLKFALQLEQAKFEEKKKLEEEDFSRLKKDRVRDEIEISELKQDLEMAKRAHEEHVSQLELQATESKAEYEKRIGELKRHLADSRKQVKELEAFSESRSLNWKNKEHTYRSFVNDQFKAFQELRASMKSVKNEVIKTKRSYLEEFKYFGIKLKGLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRIRPFLSGQSQSHTTIEFVGDDGELVVSNPLKQGKENRRLFKFNKVFGQAASQEEVFIDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQNVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTELKTKTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVISALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNREGRDVRELMEQLASLKDAIARKDEENERLQSLKANHNGSKLGIVSLRHESSSPRRHSIGTPRNSMRRQGAKSFGVNDKAASDMDNCSEYSDKNSEAGSHQSMDDFRNKSSSLRLKLAREDINQNLNEDMELLKFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKAAETTPAKERTADNLLAESTEKPIMPSKIPKAPQVQQVQPKLQTRTSRLSLNRSSSKALSSVRKPTGGSSSSVKPVKRWQ 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00089 1035 MobiDBLite consensus disorder prediction 956 1035 - -
Sebi249g00089 1035 Coils Coil 785 815 - -
Sebi249g00089 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 808 IPR027417 -
Sebi249g00089 1035 SMART kinesin_4 501 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi249g00089 1035 FunFam Kinesin-related protein3 609 813 - -
Sebi249g00089 1035 Pfam Calponin homology (CH) domain 41 137 IPR001715 GO:0005515
Sebi249g00089 1035 Coils Coil 352 408 - -
Sebi249g00089 1035 Gene3D - 35 141 IPR036872 -
Sebi249g00089 1035 Gene3D Kinesin motor domain 623 813 IPR036961 -
Sebi249g00089 1035 ProSiteProfiles Calponin homology (CH) domain profile. 36 138 IPR001715 GO:0005515
Sebi249g00089 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 383 IPR027640 GO:0003777|GO:0007018
Sebi249g00089 1035 ProSiteProfiles Kinesin motor domain profile. 503 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi249g00089 1035 SUPERFAMILY Calponin-homology domain, CH-domain 38 140 IPR036872 -
Sebi249g00089 1035 Pfam Kinesin motor domain 623 769 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi249g00089 1035 MobiDBLite consensus disorder prediction 987 1035 - -
Sebi249g00089 1035 Gene3D Kinesin motor domain 444 622 IPR036961 -
Sebi249g00089 1035 SMART ch_5 38 136 IPR001715 GO:0005515
Sebi249g00089 1035 PRINTS Kinesin heavy chain signature 672 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi249g00089 1035 PRINTS Kinesin heavy chain signature 721 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi249g00089 1035 PRINTS Kinesin heavy chain signature 578 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi249g00089 1035 MobiDBLite consensus disorder prediction 836 850 - -
Sebi249g00089 1035 MobiDBLite consensus disorder prediction 811 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00089 Sebi-Chr249 1041491 1048910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00089 471 771 Calmodulin-binding Proteins AT5G65930 36.364 5.96e-52 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00089 K10406 - gmx:100812813 1599.33