Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00080 ATGCAATGTCTTGGAGCAATCTGTGGTGCTGGTGTGGTTAAGGGCTTTGAGGGTAATGCTAGATATGAGTTGTTCAAAGGTGGAGCAAATTTTGTAAATCCTGGATACACCAAGGGTGATGGTCTTGGAGCTGAGATTGTTGGTACCTTTGTTCTTGTCTACACCGTTTTTTCTGCCACTGATGCCAAGAGAAACGCTAGGGACTCTCATGTTCCTATTTTGGCTCCCCTTCCCATTGGGTTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTTGGAGCTGCTATCATCTTCAACAGGGACTTAGCATGGGATGACCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCTCTTGCTGCTTTGTATCACCAGATAGTTATCCGAGCCATTCCTTTTAAGACAAGGGCTTAA 453 0.4614 MQCLGAICGAGVVKGFEGNARYELFKGGANFVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNRDLAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKTRA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00080 150 SUPERFAMILY Aquaporin-like 2 142 IPR023271 -
Sebi249g00080 150 FunFam Putative aquaporin PIP-type 7a 13 145 - -
Sebi249g00080 150 PRINTS Major intrinsic protein family signature 120 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi249g00080 150 PRINTS Major intrinsic protein family signature 44 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi249g00080 150 PRINTS Major intrinsic protein family signature 80 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi249g00080 150 Pfam Major intrinsic protein 1 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi249g00080 150 Gene3D Glycerol uptake facilitator protein. 1 148 IPR023271 -
Sebi249g00080 150 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 145 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00080 Sebi-Chr249 980374 981032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00080 1 150 Major Intrinsic Protein MIP AT1G01620 86.667 3.87e-91 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00080 K09872 - gmx:100812711 298.13