Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00069 ATGGAAGGATGGTCAACTTTATCAAATGGGTATTCCTTAGATTGCCTTGGAGTTGAAACTGTTGGGGCATTTCATGGTAACGGTTGTTGCCTTGTAAAAGATCATGTAGATAGTGCTGACCATGACAAAGCTAAACAAAAATGTTTGTTTTATCAACTTTTCGCTGTTTACCTAAAGGAGAATTGTTCTAGAGGCAATGTTCGGCCTGTGCCAGTTTTGCTCGGTGATGGTCAATTGCTAGATTTGTACAAACTGTTCTACCTTGTGAAGGAAAGAGGCGGGTATGCTGTGGTGTCGAGAAAAGGATTGTGGGGCTATGTGACAAAGGAATTGGATTTGAACCTTCAAGTTTTGGCTTCGGTGAAATTAGTTTATGATAAGTATCTGACTGATTTTGAAGGATGGCTCAGGGAAACTTTTGAAGGGAATAATTTCAAAAATGGGAATAACAGGTGTGATTGGGGTTCTAAGTCGTTGCCATTAGATCTAGCTGGGGAGTTTAGAGGCCTATTATGCTCAAATGTAAAGGACAAAGATGATGAACTTGTCCAGTTAGAACCAAATAAAATTATAAAGTACATTGATTTGGTTAACCACAAGAGTGATACTAATTTGTTGGACACCAAAAATCAAAATAACAAATGTGAGGATGCCCAACATCCTGATGGCGATGATGATGAAAAACTCAGTAATGGTATTGAGGATGATCTTGCTACCTCGGTCGCGGAAATTGCTGAGAAGGAATTTAACTCTCGCAAACGCAAAAGGGAGGCATTATCAGGAATGCTAAACTGGATGAAACATATTGCAAAGCATCCTCTTCATCCTTTAACCCAGTCAATACCAAAACCATCAAAGTGGAAGGAGTATAAAGGACAGGACTCTTTTGTTCAGATACTGAGGGCAAGAGAGGTTCTGTTGCTGAGACAGCATGTAGAACCAAACAGTGGATCATCTTCTTCGCAGAGTCGATGGTGTGATCAAGTGACCGGCTCGAAAGAGAAATTGGTGGTGGATCTATGTGGTGATCCTTGTGTCGAAAGTATTCCTAGTGATATGTGGAGGTTAAGCGATGTATCTCGTTGA 1086 0.4052 MEGWSTLSNGYSLDCLGVETVGAFHGNGCCLVKDHVDSADHDKAKQKCLFYQLFAVYLKENCSRGNVRPVPVLLGDGQLLDLYKLFYLVKERGGYAVVSRKGLWGYVTKELDLNLQVLASVKLVYDKYLTDFEGWLRETFEGNNFKNGNNRCDWGSKSLPLDLAGEFRGLLCSNVKDKDDELVQLEPNKIIKYIDLVNHKSDTNLLDTKNQNNKCEDAQHPDGDDDEKLSNGIEDDLATSVAEIAEKEFNSRKRKREALSGMLNWMKHIAKHPLHPLTQSIPKPSKWKEYKGQDSFVQILRAREVLLLRQHVEPNSGSSSSQSRWCDQVTGSKEKLVVDLCGDPCVESIPSDMWRLSDVSR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00069 361 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 38 335 - -
Sebi249g00069 361 SUPERFAMILY ARID-like 44 138 IPR036431 GO:0003677
Sebi249g00069 361 Gene3D - 32 145 IPR036431 GO:0003677
Sebi249g00069 361 CDD ARID 50 133 - -
Sebi249g00069 361 SMART bright_3 45 138 IPR001606 GO:0003677
Sebi249g00069 361 ProSiteProfiles ARID domain profile. 44 137 IPR001606 GO:0003677
Sebi249g00069 361 MobiDBLite consensus disorder prediction 209 228 - -
Sebi249g00069 361 SMART ARID_2 41 133 - -
Sebi249g00069 361 MobiDBLite consensus disorder prediction 213 227 - -
Sebi249g00069 361 Pfam ARID/BRIGHT DNA binding domain 53 133 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00069 Sebi-Chr249 852604 855169 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Sebi249g00069 ARID 7.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00069 - - gmx:100819320 435.261