Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00067 ATGTCTTCTGATCTGTATGGTTTTGGCACTAGTTTGCACACACATTCAAGCTCAGAACTGGTCTCCTCTGAAGGAGGTGGAGACCTTCCATTTTTCTCTGACCCTTTCCCTTTCTTCACCAGCTCTCACACTCACACTGATGTAGGTGTAGCTCAACACAATTCCAACCCATTTGATGAAGCTCTTCCTTCTCTTGACCCATTTTCCTCCACTCCTTTTTTCTCCTTCTCTCCTCCAAGTTCCCACTTGGAAAGCCTCAGCCTTTATCATCATCAGGCTACTAATAACCGTGTGCAGCCTCTGTCAAATGGCCCAAATCTAGCAAGTGAATTGGGAAGTTTCTCAGCTTTTGATGGGTCAGAAGTGAAAAGTGAGGGTGTTGATTACACCTACAATCAGCAATTCCTTCCTCATAGTTACAATGGTGCTGAGAATGTATATAAGTACATGCAATTGCAAAGGAGCTTCAGCAGTAACTCTTTTGAAGGGAAGCCAGGTTTTCTGTTCCAACCTCAACATGATGCTCTGCTTGACGATTCCCCAAAATTTCAAAGCCATGACATGGACTCTCCTGAAAACAGTGGACAAATGAGGAGGAACATGAAAGCAAATCACATGTCTCCAACGGAAGGGTCGTTGTTAGAGGAACCAAACTTCAAAGTAGGGCGTTATAGTGCTGAAGAAAGAAAAGAAAAAATTTCAAAATACAGAGCCAAGAGAACCCAGAGGAACTTCAACAAGACCATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGACCACGCATACGTGGCAGGTTTGCCCGCAACGACGAGGCCAGCGAGATTTTCAAGGCTCCGTGTTCTAACAGAGATGAAGACGAAGTCGATTTCTGGATTGAAGAATTGCGGTTGCATGAGGAGCAAGACGATGTAACAGTACTGGGAGCAGAACAATATGTGAAAAGCTATGGGGCTAGTCAATTTCAATACTGTGGCTTTTGA 987 0.4438 MSSDLYGFGTSLHTHSSSELVSSEGGGDLPFFSDPFPFFTSSHTHTDVGVAQHNSNPFDEALPSLDPFSSTPFFSFSPPSSHLESLSLYHHQATNNRVQPLSNGPNLASELGSFSAFDGSEVKSEGVDYTYNQQFLPHSYNGAENVYKYMQLQRSFSSNSFEGKPGFLFQPQHDALLDDSPKFQSHDMDSPENSGQMRRNMKANHMSPTEGSLLEEPNFKVGRYSAEERKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASEIFKAPCSNRDEDEVDFWIEELRLHEEQDDVTVLGAEQYVKSYGASQFQYCGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00067 328 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 53 292 IPR045281 GO:0009909
Sebi249g00067 328 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
Sebi249g00067 328 Pfam CCT motif 229 271 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00067 Sebi-Chr249 824931 826506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00067 225 276 C2C2-CO-like Transcription Factor Family AT5G24930 48.077 2.82e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi249g00067 CCT 6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00067 - - gmx:100816547 357.836