Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00063 ATGGCTTCATCATCAGCTGGATTCAGCTACTCAGATGTCTCATCTGGTAACCCATCAACGATTCAAAACCATCTTCTCAACAATATCCAACAAAGCTATGTGTCCGATCCAGAGATGTTCAACCTCACCACAGGCATGGAGATGATAGGCTTCTCCAAGCATCTTCAACAACAGAGTCACACCAGCAAAGCAGGTCAACACTTAGGTCCCTCCTCCTCAAAAACCATGAATGAGTCTTCCACCAATTTCTATCACCAACATGAGATTTCTGAGACAAGTGGTGAGAATCTAATAGTCGGTGCCCATGATTCTGTTTCTGCCCCGTGGCAGGAAAACAGATTACTTGTAGATGATTCTTCTTTCAGCAGGTGTGTGTTTCCTTGTGAAGGTAACGAAAGACCAAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACAAACCCTTCAAGTATTGGGTTGCAGTCTTTTGAGCTAAGACACACCACTGACCATCATCATGTTCATCAACAACAAATGTTGCAAAATGTTTATCAAGGACATTTCGTGCTCAAGAACTCCAAGTTCTTGGTTCCTGCACAGGATCTGCTAAACGAGTTTTGTAGTCTAGGGACAAAGCAAAATGATAAGAGAAAGACAAAGCTGCTTTCGATGCTGGAAGAGGTTGAGAGAAGATACAGGCACTACTGTAACCAGATGAAGACTGTGGTCTCTTCCTTTGAAGCAGTAGCTGGTAATGGTGCTGCCAAGGTGTACTCAGCTTTAGCTCTGAAAGCCATGTCAAAACATTTCAGGTGTTTGAAAGATGGGATTTTGGATCAGATTGAGGCAACAAGGAAAGGCATGGGAGAGAGAGACCCAATTGCACCAGGAACAAGCAGGGGAGAAACACCAAGGCTTAAAGTGATTGACCAAGCACTGAGACAACAGAGAGCTTTCCAGCAACTCAACATGATGGAAACCCATCCTTGGAGACCTCAACGCGGCCTTCCTGAACGATCCGTTTCCGTTCTTCGGGCTTGGCTTTTTGAGCACTTTCTCCATCCGTAA 1044 0.4473 MASSSAGFSYSDVSSGNPSTIQNHLLNNIQQSYVSDPEMFNLTTGMEMIGFSKHLQQQSHTSKAGQHLGPSSSKTMNESSTNFYHQHEISETSGENLIVGAHDSVSAPWQENRLLVDDSSFSRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRHTTDHHHVHQQQMLQNVYQGHFVLKNSKFLVPAQDLLNEFCSLGTKQNDKRKTKLLSMLEEVERRYRHYCNQMKTVVSSFEAVAGNGAAKVYSALALKAMSKHFRCLKDGILDQIEATRKGMGERDPIAPGTSRGETPRLKVIDQALRQQRAFQQLNMMETHPWRPQRGLPERSVSVLRAWLFEHFLHP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00063 347 SMART prehox3 176 271 IPR006563 -
Sebi249g00063 347 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 74 347 - -
Sebi249g00063 347 MobiDBLite consensus disorder prediction 54 81 - -
Sebi249g00063 347 Pfam Associated with HOX 206 269 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00063 Sebi-Chr249 751521 753106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00063 181 347 Homeobox Transcription Factor Family AT4G36870 47.418 7.27e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00063 - - gmx:100787954 476.478