Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00057 ATGGCCACAAAAGAGTCAAGCTCTGCTGCTTCTGCTTCAGCTTCAGCTTCAGGGGATGCTAAAATTAAAAGGGTTCTCACACATGGTGGTAGATATGCACAGTATAATGTGTATGGAAACTTGTTTGAGGTGACTTCCAAGTATGTGCCTCCCATTCGCCCAATCGGTAGAGGGGCTTATGGCATCGTATGTGCTGCTGTTAATTCCGATACACATGAACAAGTTGCTATCAAGAAGATTGGTAATGCATTTGACAATATAATTGATGCTAAAAGGACATTGAGAGAAATCAAGCTCCTTCGTCACATGGACCATGAAAATATCATTGCCATCAAGGATATCATACGACCCCCCAAAAAGGAGACCTTTAATGATGTATACATCGTTTATGAATTGATGGACACTGATCTTCATCATATAATTCATTCTGACCAACCTCTTAGAGAAGAACATTGTCAGCTGTTACGGGGCCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGATCTTAAGCCCAGTAATTTGCTAATGAATGCGAACTGTAACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACAACATCTGAAACAGATTTCATGACAGAGTATGTTGTCACAAGATGGTACCGAGCCCCAGAATTGCTCCTTAATTGTTCTGAGTACACTTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCATTGTTTCCTGGGAAAGACTATGTTCATCAACTAAGGCTTATAACAGAGTTAATAGGTTCACCTGACGATGCTAGCCTTGGATTTCTCCGAAGTGATAATGCCAGGAGATATATTAGACAGTTTCAACAATACCGGAAACAAAAATTCTCAGCTAGATTCCCTAACATGATGCCTGAGGCATTGGATCTGTTAGAAAAGATGCTTATCTTTGATCCAAACAAACGCATCACAGTTGATGAGGCACTATGTCACCCATATCTTTCATCACTTCATAACATCGATGATGAGCCAGTCTGTCCAAGGCCATTCAGTTTTGATTTTGATCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTTATCTGGAAGGAATCAGTGAAGTTCAATCCTGATCCACCCTGTCAGTAA 1137 0.409 MATKESSSAASASASASGDAKIKRVLTHGGRYAQYNVYGNLFEVTSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDQPLREEHCQLLRGLKYVHSANVLHRDLKPSNLLMNANCNLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIRQFQQYRKQKFSARFPNMMPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNIDDEPVCPRPFSFDFDQPTCTEEHIKELIWKESVKFNPDPPCQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00057 378 FunFam Mitogen-activated protein kinase 34 144 - -
Sebi249g00057 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Sebi249g00057 378 ProSiteProfiles Protein kinase domain profile. 49 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi249g00057 378 Gene3D Transferase(Phosphotransferase) domain 1 133 357 - -
Sebi249g00057 378 ProSitePatterns MAP kinase signature. 84 182 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sebi249g00057 378 SMART serkin_6 49 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi249g00057 378 ProSitePatterns Protein kinases ATP-binding region signature. 55 79 IPR017441 GO:0005524
Sebi249g00057 378 FunFam Mitogen-activated protein kinase 133 357 - -
Sebi249g00057 378 Pfam Protein kinase domain 53 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi249g00057 378 SUPERFAMILY Protein kinase-like (PK-like) 52 338 IPR011009 -
Sebi249g00057 378 CDD STKc_TEY_MAPK 42 373 - -
Sebi249g00057 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 47 331 - -
Sebi249g00057 378 Gene3D Phosphorylase Kinase; domain 1 32 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00057 Sebi-Chr249 696837 699349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00057 8 373 MAP Kinase Gene Family AT4G01370 79.515 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi249g00057 Pkinase 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00057 - K20600 tpra:123916746 721.079