Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00052 ATGGATGAGCTTGCGTGCTTGATGGACTGGGATTTGGAAGCTATTGTGAGAGGATGCAACGGTGAAGCACCAACAGCCACCATCATGGACGACCCACATCTCAATTTTTCTCATTTCTTCTCAGAACAAGATGAGCTACTTGGCAGTTTTCCTCAATTCTCAGAAACCACTAATGTCTTTGATGAATTGGAAGAGCTCTACAAACCTTTCTATCCAGTTTTGCACCCTCTTTCATCACAGACCATAGTCACAAGTTCCTTACCTATCCCCAAAGAACCTGAAGAAGCCAAAGTACTAAAAGCATCAGAGAAAGCAGCTTCACAAGATTTGCAAAAAGCATCAGAGAAAGCAGCTTCACAAGATTTGCAAGTTCCCACAGTATCTAAATATAAAAGAAGCAAGAAGAACCAGAACAAGAGTGTGGTCATGAAACAGGTGACAGCAGGGGATGGTGTGTGTGATGCTGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCACCTTATCCTCGCAGCTACTATAGATGCAGCAGTTCCAAAGGATGCTTGGCAAGGAAACAAGTTGAAAGGAGCAATTTGGATCCAGGAGTTTTTTTGGTTACATACACAGCAGAACACAATCATCCCCAACCAACTCGCAGAAATTCATTAGCAGGGAGCACCAGGAATAAGAACAATTCCATGGTTACACATCCAATTCCAAGAAGTGGTGACCAACAACACACCTGTTCATCAAATTCCTCATCAACAGAAACTGATCACTCTCCAAGGACACCTAATTTGGTGGTGGTGGCCTCATCCAACATTGAAGATGAGCTTGTGACAAGTGTGCAACAAAGTAATAAAGGCTTGGAGAAAGGGGAAGATTTTCTTGAGTGGTTGGATGATGCTGAAGGTGGTGATGGTTGGATTCCAAGCATAGAGTTGGAAGAACTCATAGGACTTAAGTTCCAACAATTTGTTGATGGCTGCGGTTTCACGGATGGTTTTGCTGACACTTAG 1014 0.432 MDELACLMDWDLEAIVRGCNGEAPTATIMDDPHLNFSHFFSEQDELLGSFPQFSETTNVFDELEELYKPFYPVLHPLSSQTIVTSSLPIPKEPEEAKVLKASEKAASQDLQKASEKAASQDLQVPTVSKYKRSKKNQNKSVVMKQVTAGDGVCDADAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSNLDPGVFLVTYTAEHNHPQPTRRNSLAGSTRNKNNSMVTHPIPRSGDQQHTCSSNSSSTETDHSPRTPNLVVVASSNIEDELVTSVQQSNKGLEKGEDFLEWLDDAEGGDGWIPSIELEELIGLKFQQFVDGCGFTDGFADT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00052 337 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi249g00052 337 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 267 IPR044810 GO:0003700
Sebi249g00052 337 SUPERFAMILY WRKY DNA-binding domain 154 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi249g00052 337 ProSiteProfiles WRKY domain profile. 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi249g00052 337 MobiDBLite consensus disorder prediction 209 262 - -
Sebi249g00052 337 Gene3D WRKY domain 139 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi249g00052 337 MobiDBLite consensus disorder prediction 208 262 - -
Sebi249g00052 337 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00052 Sebi-Chr249 598824 600091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00052 1 230 WRKY Transcription Factor Family AT4G23550 50.870 2.31e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi249g00052 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00052 K13426 K13425 gmx:102663255 353.599