Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00051 ATGGATGAGAACTTGCTCGACGATATTATCAGGAGGCTTGTATCGGCGAAGAACGGTAGAACAACGAAGCAGGTGCAGCTTACGGAGTCTGAAATCCGACAGCTCTGTGCTTCCTCCAAGGAGATCTTCCTCAGTCAGCCTAATCTTCTCGAACTCGAAGCTCCTATCAAGATTTGTGGTGATGTCCATGGCCAATTTTCAGATCTTCTGAGGTTATTTGAATATGGGGGATTCCCACCTGAAGCAAATTATTTATTTCTTGGAGATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGCTTACTCCTTGCATACAAGATCAAATACAAGGAGAATTTCTTTCTTCTCAGGGGAAATCATGAATGTGCCTCCATCAACCGTATATATGGTTTCTATGATGAGTGCAAGAGGAGGTTTAATGTTCGCCTCTGGAAGACATTTACTGACTGTTTTAATTGTCTCCCTGTCGCTGCTCTAATAGATGAGAAGATCCTTTGCATGCATGGTGGACTATCACCTGAACTTAAAAACTTAGATCAGATTAGGGGTATTGCTCGCCCTATTGATGTGCCAGATCACGGCCTTCTCTGTGACCTTCTATGGGCTGATCCTGATAAAGATCTTGATGGATGGGGAGAAAATGATCGAGGTGTTTCGTTTACCTTTGGGGCTGACAAGGTTGTTGAATTTCTTGAACAGCATGATCTCGATTTGATCTGTAGAGCTCACCAGGTTGTAGAAGATGGATATGAGTTTTTTGCCAAACGACAGCTGGTGACTATATTCTCTGCACCAAATTACTGTGGTGAATTTGATAATGCTGGTGCTATGATGAGCGTGGATGACACCTTAACATGCTCTTTCCAGATACTTAAGTCTTCTGATAAGAAAGGGAAAGTTGGATTTGGCAACAACACATCAAGACCAGGAACTCCACCTCATAAGGGGAATGAGAGAAAAATGGCTATGGTCTTTGGGGCAATTCTTTTCACTGAGGTTTACACCTTCACGAGATCGGTGGCGTGCATATGGTCCGGCACGCCCTTCCCCCACGCACGCAGAGTGACCGCCGTTGCCGCTTTCACCGAACCTCCAACTCCCACCTTTTACACCGCCGGATCCGATGGCTCTATCATCTGGTGGACCCTTTCCACTTCCACTCCCACCCCGCAAGTTAAAGCCGTGGGCATGTTGTGTGGTCACGCAGCTCCCATCACTGATCTTGGCCTGTGTAGTCCCATCGCAGCAGAAGAAAACGGTTATGGTTCAAGTAGAACTGGGAAGCAACAGATGGTTTCGATATCAGAGGACCCTCGTGATGGCGGGGAAAGCTTGGCAAGTTCACACAAAGATAAATCTCAGTTGGAAAGTTCTTTTAGCTCTGAGGGGTTCGGTGGTGTGGATCAAGTTATTTCTGTTTTAACCTATGGGAACATTGTTGCTTTTATATTGAAAAATCGCTGTATTTTTAGGTCATTGTCTAGTGATACTACAATTGGAGAGGTTTCTTTTGTGGACAATCTTTTTTGTTTGGATGCGCATTCCACACAAGCACATGCTACCGGTGGCACTTTTCTTGAAAGTGATGATGTGGGGAATATGCCTAATACCCTTGAAGGTGGCGACTTGATTCCACTACATTTTGTTGTGTGGAATAATAGAGGTTATGCAATTATCTACAAAATATCGTATCGGAATGATGTTTTTCAATGTGAACCTCATTCTGAAATTCCTGCTACTCATTATCAGCCTGATATGAGATTATCTATCTTTTTCCTACAACTAAATCAATATCTTGTACGCATCAAGTCAGTTTGCTTTCATTATGAGGAACCTTTACTATGGAGACCGCATGTCACAGTCTGGTCACCGCATCATTTTGATGAGGGTAAATTGTACCGTCAATGCCGAATGATCAGTGATGGTGTATCTTTCACCAATTGGTCTGAGAAGTCTATTCAACTCAAGAGACTGGATGATCTAGAGACTGCATCAACTTTTGGTGATGATATAGATAACTTACACATCAATAGCATAAGTAATTGTCATGCTTACAAGGGGAAGATAGTCTCTTCTTCTATGATTATCTCTGAGAACCTCTTTACTCCTTATGCTGTTGTATATGGATTTTTGAGTGGAGACATAGAGGTTGTAAGATTTGACCCGTTTCAAGGGATTTGCTTGGATGGTGCAAGTTCCAATCCTGATGAACAGTCAGCTGCTTGCAAACAGTATTTCTCAGGACATACAGGTGCGGTACTTTGTTTGGCAGCACATCAAATGACAGGTAGTTCTAAAAGCCAGACTTTTAAACGGGTTTTAGTGTCTGGAAGTACGGATTGCACAATTCGTATATGGGATCTTGACACTGGCAGTCTTATTATGGTAATGCATCATCATGTGGCTGCAGTGCGTCAAATTATTCTCCCCCCATCTTTGACTGGACATCCTTGGAGTGACTGCTTCATTTCAGTTGGAGAGGATGCATGTGTTGGTCTTGTTTCTCTTGAGACCCTGCAGGTGGAGAGAATGTTTCCTGGACATACGAACTATCCTTCTAAAGTTTTGTGGGACGGAGCAAGAGGTTATGTTGCCTGTCTCTGTCAAACGCATTATGGAACTTCTGATGGTGATGTATTATACATTTGGGATGTAAAGACTGGTTCCCGTGAGCGAGTCCTACGTGGAACAGCTGCACATTCAATGTTTGATCATTTTTGTAAAAGCATCAGCAGTAATTCCATATCTGGCTCATTGCTGAATGGAAATACATCAGTCTCTTCATTACTTCTTCCAATAGTTGATGATGCAAGGTTCTCTAACTCCCCCTTAAGTCTGTCCAAGAACTTGCTTACTTCATCAAGGTCATCACCAAGTATTTCGAATATGGCTGAGCTGAATTCTTCTAAAACAAATGCAGGAAAAGGAAATTCAGCAAAGCCGAATTCGTCCTCTCTGATTGGTCTCCTGAGTAACAAGCTTCCTATCAAATGCTCTTGCCCATTCCCTGGCATTGTGTCTCTGAGCTTTGATCTTGCATCATTGATGTTCCCTTTTCAAAAGAAGGAGTCCATGGAAAATGGTGATGGCAAGCCAGTGAATATCAATTTGAAGCAGCAGGAAGTTCAGGAGCAAAATCCCAGCTACCATAATCCAGAAACTTTAGAGGGGCACGACTGGGTTAGCCTATTTGAAGAATACATGATCCGCTACAGCTTGTCATTTTTACATTTGTGGAGTGTAGATAGCGAGCTTGATAATTTGCTGATAAGTGATATGAAATTGAGGAGACCGGAAAACTTTATAGTAGCTTCAGGTCTGCAGGGGGATAAAGGTTCCTCGACATTGACATTTCCTGGTCAAAATGCTACCCTTGAGCTCTGGAAATCATCATCTGAGTTTTGTGCAATGAGGTCATTGACGATGGTATCCCTTGCCCAACGTTTAATTAACTTGTCTCACTCTGGTTCAGCAGCCAGCAGTGCTTTAGCAGCATTCTATACCCGGAATTTCATGGAAAATTTTCCAGATCTGAAGCCCCCCTCATTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCGGCACGCTCTATATTCCATTGTGCTGCGTCTCATGCTATTCCTCTACCTCTTTGCAATTCAAAACCCACTGAGTCAACTATTACAAGCTCTGGAAATGGAAGTAGAGACAAACTTCTGGGAGATATGACAGCAGAGGGCCTATCTCCTAATGCAGAAAAACGAGGGATTTCCCAAGATGAGGAATCCAAGATACTTTCTTGGCTAGAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGTGGAACAAGTCAAGATGCAATGACATCTCACATTATTGTTGCTGCTGCACTGGCTATCTGGTACCCTAGTCTTGTAAAGCCAAGTCTTTCCACATTAGTTGTTCATCCATTAATCAAGTTGGCCATGGCCATGAATGAGAAGTACAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGCACATGGAAAGAATGCATTGTCTCTGAGATTCCTCGTCTTATTGGGGATATTTTTTTCCAAGTAGAGTTGAGTGGTCCATCTTCCAAGTCAATGACAGAAATTCCAGTTGCATCTTTTTCTATTAAACAGACTTTAGTGGAGGTTCTTCTTCCAAGTTTAGCTATGGCTGATATACCAGGATTTTTGGCTGTGATAGAAAGCCAAATTTGGTCAACTGCATCTGATTCACCTGTCCACCTGGTGTCCTTGTTGACTCTTATAAGGATCATGCGTGGTTCTCCAAGAAATTTGGCTCAGTATCTTGACAAGGTTGTTAACTTCATTCTACAGACTATAGATCCTAGCAACTCAGTTATGCGGAAGGCATGCTTCCAGAGTTCAATGACAACTTTAAAGGAAGTTGTACGTGTATATCCTATGGTTGCTGTCAACGAGTCATGGACCAGACTGGCAGTTGGAGATGTGATTGGAGAAATTAACAACGCAAGCATTCGTGTCTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAAGTTTGCTCACTGCAGCAGCATCGGGAACAATGTTAACTACTGCTATTTCAGCGCTAAGCTTTTCTCCAGATGGAGAGGGTCTGGTTGCTTTTTCGGAACATGGGCTAATGATTAGATGGTGGTCACTGGGATCTTTCTGGTGGGAGAAACTGAGCCGGAACTTTGTTCCTGTCCAGTGCACCAAACTAATCTTTGTTCCTCCTTGGGAGGGATTCTCACCCAATTCATCCAGGTCAAGCATTATGGCCAACATTTTGGAAACTGGCAGGCAGTTGGATTTTCAGAATGGGTTGGTGAACGGAAAGTACTTCTTACAAGACATGGTCATGAATTGGGCAGTTTTCAGTTCAGCTCATACTAGCAACAGAAGTGTTTTTTATCAGATCATACTAACATACTATATGAGGAGATATTCATTGGAGCGCTTACAATTCGACACCGCCTTTGTGAGGATTGATTGA 5058 0.4296 MDENLLDDIIRRLVSAKNGRTTKQVQLTESEIRQLCASSKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELKNLDQIRGIARPIDVPDHGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEQHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSDKKGKVGFGNNTSRPGTPPHKGNERKMAMVFGAILFTEVYTFTRSVACIWSGTPFPHARRVTAVAAFTEPPTPTFYTAGSDGSIIWWTLSTSTPTPQVKAVGMLCGHAAPITDLGLCSPIAAEENGYGSSRTGKQQMVSISEDPRDGGESLASSHKDKSQLESSFSSEGFGGVDQVISVLTYGNIVAFILKNRCIFRSLSSDTTIGEVSFVDNLFCLDAHSTQAHATGGTFLESDDVGNMPNTLEGGDLIPLHFVVWNNRGYAIIYKISYRNDVFQCEPHSEIPATHYQPDMRLSIFFLQLNQYLVRIKSVCFHYEEPLLWRPHVTVWSPHHFDEGKLYRQCRMISDGVSFTNWSEKSIQLKRLDDLETASTFGDDIDNLHINSISNCHAYKGKIVSSSMIISENLFTPYAVVYGFLSGDIEVVRFDPFQGICLDGASSNPDEQSAACKQYFSGHTGAVLCLAAHQMTGSSKSQTFKRVLVSGSTDCTIRIWDLDTGSLIMVMHHHVAAVRQIILPPSLTGHPWSDCFISVGEDACVGLVSLETLQVERMFPGHTNYPSKVLWDGARGYVACLCQTHYGTSDGDVLYIWDVKTGSRERVLRGTAAHSMFDHFCKSISSNSISGSLLNGNTSVSSLLLPIVDDARFSNSPLSLSKNLLTSSRSSPSISNMAELNSSKTNAGKGNSAKPNSSSLIGLLSNKLPIKCSCPFPGIVSLSFDLASLMFPFQKKESMENGDGKPVNINLKQQEVQEQNPSYHNPETLEGHDWVSLFEEYMIRYSLSFLHLWSVDSELDNLLISDMKLRRPENFIVASGLQGDKGSSTLTFPGQNATLELWKSSSEFCAMRSLTMVSLAQRLINLSHSGSAASSALAAFYTRNFMENFPDLKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIPLPLCNSKPTESTITSSGNGSRDKLLGDMTAEGLSPNAEKRGISQDEESKILSWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPSLSTLVVHPLIKLAMAMNEKYSSTAAELLAEGMESTWKECIVSEIPRLIGDIFFQVELSGPSSKSMTEIPVASFSIKQTLVEVLLPSLAMADIPGFLAVIESQIWSTASDSPVHLVSLLTLIRIMRGSPRNLAQYLDKVVNFILQTIDPSNSVMRKACFQSSMTTLKEVVRVYPMVAVNESWTRLAVGDVIGEINNASIRVYDMQSVTMIKVLDASGPPGLPSLLTAAASGTMLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSFWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILETGRQLDFQNGLVNGKYFLQDMVMNWAVFSSAHTSNRSVFYQIILTYYMRRYSLERLQFDTAFVRID 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00051 1685 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Sebi249g00051 1685 SUPERFAMILY Metallo-dependent phosphatases 22 297 IPR029052 -
Sebi249g00051 1685 Gene3D - 655 985 IPR015943 GO:0005515
Sebi249g00051 1685 SMART WD40_4 1540 1574 IPR001680 GO:0005515
Sebi249g00051 1685 SMART WD40_4 741 789 IPR001680 GO:0005515
Sebi249g00051 1685 SMART WD40_4 341 384 IPR001680 GO:0005515
Sebi249g00051 1685 SMART WD40_4 840 886 IPR001680 GO:0005515
Sebi249g00051 1685 MobiDBLite consensus disorder prediction 953 981 - -
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Sebi249g00051 1685 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Sebi249g00051 1685 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 749 800 - -
Sebi249g00051 1685 Gene3D - 1 306 IPR029052 -
Sebi249g00051 1685 PANTHER RABCONNECTIN-3B, ISOFORM A 340 421 - -
Sebi249g00051 1685 ProSitePatterns Trp-Asp (WD) repeats signature. 776 790 IPR019775 -
Sebi249g00051 1685 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Sebi249g00051 1685 ProSiteProfiles Trp-Asp (WD) repeats profile. 776 798 IPR001680 GO:0005515
Sebi249g00051 1685 Pfam WD domain, G-beta repeat 744 789 IPR001680 GO:0005515
Sebi249g00051 1685 SMART pp2a_7 27 297 IPR006186 GO:0016787
Sebi249g00051 1685 FunFam Serine/threonine-protein phosphatase 1 303 - -
Sebi249g00051 1685 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Sebi249g00051 1685 SUPERFAMILY ARM repeat 1147 1505 IPR016024 -
Sebi249g00051 1685 CDD MPP_PP1_PPKL 6 294 - -
Sebi249g00051 1685 SUPERFAMILY WD40 repeat-like 352 900 IPR036322 GO:0005515
Sebi249g00051 1685 MobiDBLite consensus disorder prediction 422 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00051 Sebi-Chr249 579501 594221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00051 56 240 Calmodulin-binding Proteins AT5G63870 30.455 6.31e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00051 K24738 - gmx:100818675 1952.56