Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00035 ATGACCCTACCCTACCCTACACTTGCATTGCTCCTTGCTCTCATTTTCGTGCTAAGTGTCTGTCCAACTTCAGCACACAAATATCAAGATTTCACATCGGCAAAGGATAGACATTACAAACTAACTGAGGAAGTGGAAGATCAAAGCAACTTATTGACTTACATTGTTCACGTTAGAAAGCCTCAGCCTCAGGGTGATGCTAATTCTCTTCACTCTGAGAATTTGCATGGATGGTACCATTCTCTCCTTCCAGCTAGCACAAAAACTGAGAACCAACAATGCATCATTTTCTCATACAAAAACATCTTGAATGGATTTGTTGGACTTGGACTATGGAAAGGTTCCAATTTAGGGGAAGGAATAATAATTGGAATCTTGGACACAAGGATATACCCTTTCTATCCTTCCTTTTCTGATGAAGGAATGCCATCTCCACCACCAAAATGGAAAGGCCACTGTGAATTCACAGGGAGAAGGACTTGTAACAACAAGCTCATTGGCGCAAGGAATTTCGTCAAAACCACAAACAATCAATCCCTTCCATTCGATGATGTTGGTCATGGAACTCACACAGCCAATACAGCCGCTGGAAGACCAGTGCAAGGTGCTAATGTCTATGGCAATGCTAAGGGAACATCTTCTGGCATGGCACCTGATGCACACTTAGCAATTTACAAGGTTTGCAACCTCTATGGTTGTTCTGAGAGTGCAATATTAGTTGGATTGGATGCTGCTGTTGATGATGGCGTTGATATACTCTCTCTCTCTCTTGGTGGACCCTCTGCTCCTTTCTTTGATGATCCAATTGCACTCGGTGCATTTGGTGCAATTCAAAAGGGAATTTTTGTTAGTTGCTCAGCTGCTAATGCTGATCCCTTTTATGGTTCATTGTCTAATGAGGCTCCTTGGATTCTCACCGTTGGTGCCAACACCATTGACAGAAAAATAATGGCAATAGCAAAGCTTGGCAATGGGAGAGAATATATTGGGGAATCAGCGTTCCAACCCAAATCCGGAGGAGATGAGACTACCCTTAGGGATTATTGA 1047 0.4288 MTLPYPTLALLLALIFVLSVCPTSAHKYQDFTSAKDRHYKLTEEVEDQSNLLTYIVHVRKPQPQGDANSLHSENLHGWYHSLLPASTKTENQQCIIFSYKNILNGFVGLGLWKGSNLGEGIIIGILDTRIYPFYPSFSDEGMPSPPPKWKGHCEFTGRRTCNNKLIGARNFVKTTNNQSLPFDDVGHGTHTANTAAGRPVQGANVYGNAKGTSSGMAPDAHLAIYKVCNLYGCSESAILVGLDAAVDDGVDILSLSLGGPSAPFFDDPIALGAFGAIQKGIFVSCSAANADPFYGSLSNEAPWILTVGANTIDRKIMAIAKLGNGREYIGESAFQPKSGGDETTLRDY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00035 348 Gene3D - 313 336 - -
Sebi249g00035 348 Pfam Subtilase family 118 311 IPR000209 GO:0006508|GO:0008236
Sebi249g00035 348 PRINTS Subtilisin serine protease family (S8) signature 118 137 IPR015500 -
Sebi249g00035 348 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Sebi249g00035 348 ProSiteProfiles Serine proteases, subtilase domain profile. 96 348 - -
Sebi249g00035 348 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 105 334 IPR045051 -
Sebi249g00035 348 SUPERFAMILY Subtilisin-like 110 332 IPR036852 GO:0004252|GO:0006508
Sebi249g00035 348 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 108 IPR037045 -
Sebi249g00035 348 Gene3D Peptidase S8/S53 domain 120 312 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00035 Sebi-Chr249 411427 412596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00035 97 337 Subtilisin-like Serine Gene Family AT1G04110 47.287 7.49e-71 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00035 - - lja:Lj2g3v2002920.1 452.595