Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00022 ATGACAACTCACATTGTTGGAGACCATGCGGGTTGGAATTTGCCCAGTTGCCAAGAGTTCTATGAGGATTGGGCCAAGAAAAGAACCTTCGCAATTGGCGACATACTTCTTTTCAAGTACAACCCCGGGTTGAACACTGTAGTACAGGTAAACAAGGAGGACTACGAGTGTTGCACTACCAAAAACACCATCCATACATACTTTGATGGGAACACTGCTTTTACTTTGGACAAAGCAGGGGAATATTTTTTCTATAGTTCCGTAGGGAGGCACTGTGAGGCAGGCCTAAAGCTCCGGGTTACTGTTCCTCAGGGAAAGCACCCTTCTCATTAA 333 0.4565 MTTHIVGDHAGWNLPSCQEFYEDWAKKRTFAIGDILLFKYNPGLNTVVQVNKEDYECCTTKNTIHTYFDGNTAFTLDKAGEYFFYSSVGRHCEAGLKLRVTVPQGKHPSH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00022 110 ProSitePatterns Multicopper oxidases signature 1. 80 100 IPR033138 -
Sebi249g00022 110 Gene3D - 1 110 IPR008972 -
Sebi249g00022 110 ProSiteProfiles Phytocyanin domain profile. 2 104 IPR003245 GO:0009055
Sebi249g00022 110 FunFam Cupredoxin superfamily protein 1 107 - -
Sebi249g00022 110 CDD Phytocyanin 2 102 - -
Sebi249g00022 110 Pfam Plastocyanin-like domain 12 95 IPR003245 GO:0009055
Sebi249g00022 110 PANTHER BLUE COPPER PROTEIN 2 103 IPR039391 GO:0009055
Sebi249g00022 110 SUPERFAMILY Cupredoxins 2 103 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00022 Sebi-Chr249 288453 289134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00022 6 102 Phytocyanin Superfamily AT4G31840 42.424 1.03e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00022 - - gmx:102660389 154.836