Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00011 ATGTTCCTTGCTTACTATACTTCACCACTCGAAGGGTCTCCTAAATTTCTTCTGTTTCCAACCCTGCTGCAGAGGGATGGAGGTAGCAAGAAAGTTGAGGAAGACTTGAGGACACCATATTCTGCTGACACAAGGGATTTGCAGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACAAATTTTAAGATGGAATGAATCAACTTCCAAGTTGCAGACCATGAGTCCAGCAACAACTTTGTTACCAGAGTCCCCAATGTCTACCAATGGAAGTCCTCTAAGAGAGGAAGTTGATGGGGCCGTCCAGGATTACCAGGAGGTCAAGCAGGATTCAAAGAAAAGAAAGATTATGCCCAAATGGATGGACCAAGTAAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTCGGTGCCAAATATCCCAGGTGA 477 0.4444 MFLAYYTSPLEGSPKFLLFPTLLQRDGGSKKVEEDLRTPYSADTRDLQVQRILSSYEKALQILRWNESTSKLQTMSPATTLLPESPMSTNGSPLREEVDGAVQDYQEVKQDSKKRKIMPKWMDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00011 158 ProSiteProfiles WRKY domain profile. 132 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi249g00011 158 Pfam WRKY DNA -binding domain 138 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi249g00011 158 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 48 158 IPR044810 GO:0003700
Sebi249g00011 158 MobiDBLite consensus disorder prediction 74 92 - -
Sebi249g00011 158 MobiDBLite consensus disorder prediction 74 95 - -
Sebi249g00011 158 SUPERFAMILY WRKY DNA-binding domain 136 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi249g00011 158 Gene3D WRKY domain 122 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00011 Sebi-Chr249 189208 189958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00011 42 158 WRKY Transcription Factor Family AT4G23810 48.837 9.80e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi249g00011 WRKY 7.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00011 - - gmx:100815760 201.06