Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00009 ATGTGGGATTTGTCATTTGCTGGGACGGCTTACATGTTTGGGAGCATATCGCCGGTCATAAAGAGCACCATGGGTTTCAACCAGCAACAGGTGGTTTTGTTGAGTGTCGCCAAGGATTTGGGTGATTGCGTTGGGCTCCTGTCTGGGAAACTCAGTGAGGTATGGCCCACTTGGCGTGTTATGCTTGTTGGGGTCATCCAGAATCTTGTCGGTTACGGCCTTGTTTGGCTTGTTGTCACTCACAGCCTTCCTTCTTTGCCTCTCTGGACGTTATCAGCATATCGAACTTCCTTGGTCGTGTTGGTGGCGGCTACTGCTCAGAGAAAATTTGCCTACCCGAGACTTGTTGCATTGGCAGTGATTCAGTTAGTGATGTGTTTGGGACTGTTGTACTATGCGTTGGGGTTGGTTGGACAAGTTTACGTGTTGGCCATATCTATGGGTTATGGGTTTGGTGCCCAATGGTCAGTTGGGATAGCTGCAACTTCAGAACTATTTGGGTTGAAGAACTTTGGGACTCTGTACAATTTTCTTACTATGGCTAACCCAGCTGGATCTCTAATTTTATCTGGTTTCGTAGCAAGCACCATATATGACTATTACGCAGAGCAGCAAGCAAAGCATAATGACACTGGTGGAACTAACGAATTCTTCTTTGCGAGGGGACTCAGGAGGGTACACAAAGCTCTCGCAGATATGAAATGTCTAACTTTATCCATGGAGATAATGAGATGGAAAGGCATGGATTCGTTGCCTGCTGCAAAGCGACGTCGTCAGAGCAAAGACGGAGGCGAGATTGAAGCATCAACGCTTCAGAAGTTGTCACCGGTGGTCATCTTCGCTCATGGTGCCGGTGCTCCTTCCTCTTCCGATTGGATGCTAAGATGGAAGACTATGTTGAAGGAGGCGCTGCACGCTGCTGATGTTGTCACTTTTGACTATCCTTGGCTCCTCCTAAGGCAGAAAAAACTGGTGGAGTTTCACTCAAATATTGTCAAGGAAACTGCAACTAAGTACCCTGGTCATCCGCTGATATTGGCAGGCAAATCAATGGGTTCTAGAGTTGGATGCATGGTGGCTAGCATGGAGGATATTAATGTTTCTGCTGTAGTATGCTTGGGCTACCCATTAAAGGGAATCAATGGTGCGGTTAGAGATGACACACTGTTACAGCTAACGGTTCCTACAATGTTTGTACAGGGCAGCAAGGATGGTCTCTGCCCACTTGAGAAGTTAGAAGCCGCCCAATGA 1251 0.474 MWDLSFAGTAYMFGSISPVIKSTMGFNQQQVVLLSVAKDLGDCVGLLSGKLSEVWPTWRVMLVGVIQNLVGYGLVWLVVTHSLPSLPLWTLSAYRTSLVVLVAATAQRKFAYPRLVALAVIQLVMCLGLLYYALGLVGQVYVLAISMGYGFGAQWSVGIAATSELFGLKNFGTLYNFLTMANPAGSLILSGFVASTIYDYYAEQQAKHNDTGGTNEFFFARGLRRVHKALADMKCLTLSMEIMRWKGMDSLPAAKRRRQSKDGGEIEASTLQKLSPVVIFAHGAGAPSSSDWMLRWKTMLKEALHAADVVTFDYPWLLLRQKKLVEFHSNIVKETATKYPGHPLILAGKSMGSRVGCMVASMEDINVSAVVCLGYPLKGINGAVRDDTLLQLTVPTMFVQGSKDGLCPLEKLEAAQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00009 416 Pfam Alpha/beta hydrolase domain 277 415 IPR046879 -
Sebi249g00009 416 Pfam Nodulin-like 1 93 IPR010658 -
Sebi249g00009 416 PANTHER TESTIS DEVELOPMENT PROTEIN PRTD 272 414 IPR026555 -
Sebi249g00009 416 Gene3D alpha/beta hydrolase 275 416 IPR029058 -
Sebi249g00009 416 FunFam Alpha/beta-Hydrolases superfamily protein 253 416 - -
Sebi249g00009 416 SUPERFAMILY alpha/beta-Hydrolases 275 410 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00009 Sebi-Chr249 171210 178787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00009 1 117 Nodulin-like Gene Family AT3G01930 51.282 6.18e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00009 K07020 - gmx:100527322 278.485