Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi249g00002 ATGGCCAATTTACCATCTTTCCTTTTCTTCTCCATCCTAATGGCACAGTCAATAACAACAAGTGCTGAGTTCAACTGTGCAATCACATCATGCGAAAACGGTGGACTTCCAATTCAGTTCCCCTTTTCATTGAGACAAGCCAATCAAGGCTATCTCTGTGGTTACCCAGGGTTCGACCTATCATGTACCAATACCAATAATAGCACTACCCTCAGCGAACCGTTACTCACTCTTCCAGAATCTGGAGACTTCGTGGTGAAACTAATCTCCCTACAAGACCAAAAGGTTTGGATTAATGACCCTGACAACTGCCTCCCAAAACGCATCATGCGTGACCGTGGATTAAATCTCAAAGGCTCCCCTTTCCAATTCAGCGATTATTACACTCTTGTCAATTTCTCCTTCCTCAGTTGCCCCTCCAATTTAACCTCTTCCTCTTTAGTACAACCCATCACCTGTTTAAATTCAAGCTCTTATCACAACAACCTTAGCTATTCGGTGGTAGCTATCATGTCGGATCCTCCCTTTCCTACGCCATGGACCTCATCGTGCCTCTTCATTTCCTCAGCTTCAATTCCGGTTCAATACACGCCTTGGTTGTTCTGGACTGATTATTACGCTGATATCCCGTTGAAATGGGATTACCCTGGTTGCGGAAGTTGTGTAGCACGTGGAGGACGATGTGGCTTCCTTGGAGACCCTGCTTTTGATGTTACTTGTTATGATCTTCCCACTCAAGGTTCACTCACTCAACCTTAA 759 0.4493 MANLPSFLFFSILMAQSITTSAEFNCAITSCENGGLPIQFPFSLRQANQGYLCGYPGFDLSCTNTNNSTTLSEPLLTLPESGDFVVKLISLQDQKVWINDPDNCLPKRIMRDRGLNLKGSPFQFSDYYTLVNFSFLSCPSNLTSSSLVQPITCLNSSSYHNNLSYSVVAIMSDPPFPTPWTSSCLFISSASIPVQYTPWLFWTDYYADIPLKWDYPGCGSCVARGGRCGFLGDPAFDVTCYDLPTQGSLTQP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi249g00002 252 Pfam Wall-associated receptor kinase galacturonan-binding 30 100 IPR025287 GO:0030247
Sebi249g00002 252 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 242 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi249g00002 Sebi-Chr249 62879 63637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi249g00002 25 241 C3H Transcription Factor Family AT2G46495 32.432 4.55e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi249g00002 - - lja:Lj4g3v3004070.1 318.546