Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi248g00027 ATGAGCCCCAAGCTAAAGGACCTTGAGCAACACATGGATATTGTTCGAAGTCTTAAACATGAGAATGTAGTTGAGCTAAAGGCATATTACCATTCCAAAGATGAGAAACTGAAGGTGTATGATTACTATAGTCAGGGGAGCATTCTCTCCGCTTTGTTACACGGTATGCAAAAGCTCAAGAAGCGAACTCAAAAGGCTCTCTATCAGCTCATGGCCTATGGATAA 225 0.4178 MSPKLKDLEQHMDIVRSLKHENVVELKAYYHSKDEKLKVYDYYSQGSILSALLHGMQKLKKRTQKALYQLMAYG 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi248g00027 74 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Sebi248g00027 74 PANTHER OS05G0588300 PROTEIN 5 60 - -
Sebi248g00027 74 SUPERFAMILY Protein kinase-like (PK-like) 6 58 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi248g00027 Sebi-Chr248 896103 896442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi248g00027 6 55 Receptor kinase-like Gene Family AT4G23740 70.000 3.23e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi248g00027 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi248g00027 - - gmx:100814524 83.9593