Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi248g00003 ATGACATGTGATACTAAGTTTGTTGTGCCTGCTATTATTGAAGGTTGTAGTGAAGCATTTGATGGTGTTAACACCTTGGTGGATGTGGGTGGAGGGAATGGCACCACCTCTCGCATCCTTGCTAAGGCTTGCCCTTGGATTCAATTGATCAATTTTGATCTTCCTCATGTCATTAATGCAGCCCCAAAGTGCAATGGAGTGGAACATGTAGCTGGTGACATGTTTCAAAGTGTCCCCAAAGCTGATGCTGCATTTATTAAGTGGGTTTTGCATGACTGGAGTGATGAAGAGTGCATCCAAATCTTAAAGAAGTGCAAAGAAGCTATTCCAAAGGAAAATGGAAGGGTTATTATTGTGGAAGCGGTGATTGAAGAAGGAGGAGGAAAACATGACAAGTTAAAAGATATAGGATTACTACTGGATATGGTGATGATGGCACACACTAATTTAGGCAAAGAAAGGACACTGAAAGAGTGGGACTATGTGATTAAAATGGCAGGATTTAGTGCATACACTGTGAAAGCTATCAATGCTGTGCAGTCTGTAATTTTGGCTTTCTCTTGA 564 0.4113 MTCDTKFVVPAIIEGCSEAFDGVNTLVDVGGGNGTTSRILAKACPWIQLINFDLPHVINAAPKCNGVEHVAGDMFQSVPKADAAFIKWVLHDWSDEECIQILKKCKEAIPKENGRVIIVEAVIEEGGGKHDKLKDIGLLLDMVMMAHTNLGKERTLKEWDYVIKMAGFSAYTVKAINAVQSVILAFS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi248g00003 187 PANTHER O-METHYLTRANSFERASE 1 170 IPR016461 GO:0008168
Sebi248g00003 187 Gene3D Vaccinia Virus protein VP39 10 174 IPR029063 -
Sebi248g00003 187 CDD AdoMet_MTases 25 119 - -
Sebi248g00003 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 184 IPR029063 -
Sebi248g00003 187 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 187 IPR016461 GO:0008168
Sebi248g00003 187 Pfam O-methyltransferase domain 13 169 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi248g00003 Sebi-Chr248 94194 95837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi248g00003 18 173 Monolignol Biosynthesis Gene Families AT5G54160 47.436 3.38e-46 153