Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi247g00030 ATGTTATCGATCCTACCCTCCATTCCTTCACACACAACCAAATTTCCCACATTTCCATCATCCATAGTGCAGAAAGCTGAACGTGATGCCGACATTAACCTCTCCCTCCCAGGAGATGGCTTCGATGTCGTCACACGCGCCAAGACTACTCTAGAGCTTGAATGCCCTGGAGTGGTCTCATGCGCGGACATTCTAGCTACCGCTGCACGTGACCTTGTTGTGATTGTTGGTGGGCCCTTCTATAAGTTGGGCCTGGGCCGAAAAGATGGCTTGGAATCTAAAGCAAGGAATACAGAAGGCCAGTTCCCAGAGCCCACCATGCCACTCTCTAAGGTAATAGACATCTTTAAGTCTAAAGGGTTCTCCGTTCAAGAGATGGTGGCTCTTTCAGGTGCACACACTATAGGTTTTTCTCATTGCAAAGAGTTTAGCTATAGGCTCTTCAACTTCAGCAAGAACAATGAATATGACCCTAAGTTTAACCCCGAATATGCTAAGGGGTTGAGGAAGTTGTGTGAGAACTACACCAAGGACCCAACCATGTCAGCGTTCAATGACGTGATGACACCTGGCAAGTTTGACAATATGTACTACAAGAACTTGAAGAGAGGGTTAGGGTTGTTGGCAACAGACAGTGCCTTGTTTGATGACAATAGGACCAGACCCTTTGTTGATATGTATGCTTCTAATGAAACCAAGTTCTTTCAGGATTTCGCTCGCGTCATGCATAAGGTTAGCATCTTGCAAATAAAGACTGGAAACAAAGGAGAG 771 0.4591 MLSILPSIPSHTTKFPTFPSSIVQKAERDADINLSLPGDGFDVVTRAKTTLELECPGVVSCADILATAARDLVVIVGGPFYKLGLGRKDGLESKARNTEGQFPEPTMPLSKVIDIFKSKGFSVQEMVALSGAHTIGFSHCKEFSYRLFNFSKNNEYDPKFNPEYAKGLRKLCENYTKDPTMSAFNDVMTPGKFDNMYYKNLKRGLGLLATDSALFDDNRTRPFVDMYASNETKFFQDFARVMHKVSILQIKTGNKGE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi247g00030 257 FunFam Peroxidase 103 245 - -
Sebi247g00030 257 PANTHER - 23 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 Gene3D - 24 257 - -
Sebi247g00030 257 ProSitePatterns Peroxidases proximal heme-ligand signature. 125 135 IPR019793 -
Sebi247g00030 257 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Haem peroxidase superfamily signature 59 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Haem peroxidase superfamily signature 77 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Haem peroxidase superfamily signature 125 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 SUPERFAMILY Heme-dependent peroxidases 24 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 Gene3D Peroxidase, domain 2 103 245 - -
Sebi247g00030 257 PRINTS Plant peroxidase signature 58 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Plant peroxidase signature 240 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Plant peroxidase signature 39 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Plant peroxidase signature 77 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Plant peroxidase signature 124 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Plant peroxidase signature 200 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 PRINTS Plant peroxidase signature 184 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 CDD secretory_peroxidase 25 257 IPR033905 GO:0004601|GO:0042744
Sebi247g00030 257 ProSiteProfiles Plant heme peroxidase family profile. 3 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi247g00030 257 Pfam Peroxidase 20 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi247g00030 Sebi-Chr247 1333252 1334454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi247g00030 24 257 Peroxidase AT5G47000 61.966 9.16e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi247g00030 K00430 - zju:107419921 365.54