Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi246g00007 ATGATTGTGCTATGTTCATTTGAAGATCAGAAGGCATCTTCATCTTCTTCTTCCAAGAAACCATTGCAAGACCTCAATATAGAGACACAATCTTCCTTATCTTCCATGATAGAAATGCCATGTTTGTTTGTTTCATATTCCATTCCTCCTTCTCCCGTTTCATTTTCGAGCCACAAGTACTTTTCTCCCTCCATGAAAACTAGTTCTTCCTCTGATTTGTTCTTGCTACATGAAATCGACAAAGATTCCACTACAAAATTGGAGAGGAAATCATCATCAGATCTTTTCAATTTTGGGAACTTCGAATTTGTGGATCTTTCAAAGACAATTTTACCTCCCAAAGACAACCCAGATGACTCCGACTCTGTTTCTTGTTATGCACTTGCACCGGTGTTAGGGTCCCAAGCAATCAAACTTGCTATACCAAGTCGTGCACTCAAGAAGTTGCAAAGCGTCCCAAGCTCGAAAACGAAGACCTCAACACCTTCAATTGCATCGGTTGCCGGGTGCACTGCCTTGTTCAATTACCGTGTACAGGGTGCTTACAAGTTTGGATTCTATGAATTCTTTAAGAAGTGCTATCCTGACATTGCTAATCTTCTTGTCGGAAAGGGCATTAGAGCAGCTACTGTTGCTTCTCTTGTTAAGACTTTGGGTCGTAGATCCCAAGGCCAGCTTGAGGAGCGAGTCCATTTCTGCGATCGTTGTGATTTCCCCATTGCTACCTATGGACGACTGAGCCTTTGTGAGCATGCTCTCTGTCTCGATTGA 771 0.4254 MIVLCSFEDQKASSSSSSKKPLQDLNIETQSSLSSMIEMPCLFVSYSIPPSPVSFSSHKYFSPSMKTSSSSDLFLLHEIDKDSTTKLERKSSSDLFNFGNFEFVDLSKTILPPKDNPDDSDSVSCYALAPVLGSQAIKLAIPSRALKKLQSVPSSKTKTSTPSIASVAGCTALFNYRVQGAYKFGFYEFFKKCYPDIANLLVGKGIRAATVASLVKTLGRRSQGQLEERVHFCDRCDFPIATYGRLSLCEHALCLD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi246g00007 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 256 IPR013083 -
Sebi246g00007 256 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 197 256 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi246g00007 Sebi-Chr246 190317 191726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi246g00007 197 256 C2H2 Transcription Factor Family AT5G01160 60.000 2.33e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi246g00007 K15685 - gmx:100817582 97.4413