Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi245g00062 ATGGGGAGACCACCTTGCTGTGACAAAATTGGGATTAAGAAAGGGCCTTGGACTCCAGAGGAAGACATCATCTTGGTCTCTTACATTCAAGAACATGGACCAGGCAATTGGAGATCAGTTCCCACCAGTACAGGTTTGATGAGATGCAGTAAAAGCTGCAGGCTTAGATGGACTAACTATCTTCGCCCAGGCATCAAACGAGGCAATTTCACTGATCATGAAGAAAAAATGATAATCCACCTCCAAGCTCTTTTGGGGCAACAGCTGAAGAAGATGCAAAATGGGGATGAGGATGGTGATCACAAAGAAGGACACTCTAATTCACAGGCAAAAGAGACTAACACCTTTGATTACCATCACCCTGTTACCAACAACACCACAACACCAAACCAAGCTTCCCCATATGCATCAAGTGCAGAAAACATAGCCCGATTGCTCGAAAACTGGATGAAGAAGAAACCCCAGAATTACCCATCAACTGAGACAAATTCAGGAAATTCCTTCAGCAACATGGTGACCACAGGATCCAGTTCTAGTGAAGGAACACAGAGCACCATCACATGCACACCAGAACAAGCTTTTGATTCTCTGTTGAGTTTCAACTCTGATCGTTCTCAATCTGAAGAAAACACCAACTTTACTGCCACTGGCCCCTTCCAAGATGAAAGCAAAGCCACTAAACCAGGAGCCACAAGTCCCTCTCATGTTGCTGGAGGAATTGGCTGTTTGATGATGGAGCAGCTCAATGCAATGAAGATCTAA 762 0.4475 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTSTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGQQLKKMQNGDEDGDHKEGHSNSQAKETNTFDYHHPVTNNTTTPNQASPYASSAENIARLLENWMKKKPQNYPSTETNSGNSFSNMVTTGSSSSEGTQSTITCTPEQAFDSLLSFNSDRSQSEENTNFTATGPFQDESKATKPGATSPSHVAGGIGCLMMEQLNAMKI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi245g00062 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi245g00062 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sebi245g00062 253 MobiDBLite consensus disorder prediction 203 230 - -
Sebi245g00062 253 CDD SANT 16 61 IPR001005 -
Sebi245g00062 253 SMART sant 13 63 IPR001005 -
Sebi245g00062 253 Gene3D - 13 66 - -
Sebi245g00062 253 MobiDBLite consensus disorder prediction 203 235 - -
Sebi245g00062 253 MobiDBLite consensus disorder prediction 90 109 - -
Sebi245g00062 253 MobiDBLite consensus disorder prediction 93 108 - -
Sebi245g00062 253 FunFam MYB-related transcription factor 13 66 - -
Sebi245g00062 253 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Sebi245g00062 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi245g00062 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 203 - -
Sebi245g00062 253 MobiDBLite consensus disorder prediction 153 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi245g00062 Sebi-Chr245 1262270 1263425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi245g00062 1 86 MYB Transcription Factor Family AT5G62470 91.860 8.89e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi245g00062 Myb_DNA-binding 8.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi245g00062 K09422 - gmx:100807020 290.812