Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi245g00045 ATGGAAAACGTTTCAGCTTTTTGTAAGGAAGAGGATCAGATGGTTTTGCCACCTGGTTTTCGGTTTCATCCAAGTGATGAAGAGCTTATTAGTCATTACCTTTACAAAAGGGTAACTGACACCAATTTCTCTGCTAGAGCCATTGGAGAGGTGGACTTAAACAAATCTGAGCCTTGGGATTTGCCATGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTTTTCTGTGTGAGAGACAGAAAATACCCAACTGGTTTGAGGACTAACAGAGCTACTGGAGAAGGATACTGGAAGGCCACAGGGAAAGATAAGGAGATTTACAGAGGAAAATCTCTGGTTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGAGAGAAAACTAACTGGGTCATGCATGAATACAGACTTGAGGGTAAATTCTCTGTTCACAACCTCCCTAAAACTGCAAAGAATGAATGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGGTGGCAAGAAAACTCATATTTCTGGGATAATGAGGTTGGACTCTTTAGGAAATCAATTGGGTTCTTCTGATCTGCCACCTCTTACAGATTTCACACCTCTCATTGGCAAAACCAAAGAACAACTGAGTGTGACTGAATCTGGTTACGTGCCCTGCTTCTCCAATCCAATTGATATTCAAAGAAACCAAGGTGGGATCTTTGATTCCTTCAGCAACTCCCTTATAGGGGGTGATATGGTAAGTGTCTCTCAGCAAACAGGTTTGACTAGTGATGTGAATGCTGAAAACTCTTCTGTTGTATCAAATTTTGACATGGGTAGTAGGAGGCCCTTTAACAATCAGCAGCACCCACCAATGGACCTTGCCAGCATGTGGAATTACTAA 888 0.4189 MENVSAFCKEEDQMVLPPGFRFHPSDEELISHYLYKRVTDTNFSARAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATGEGYWKATGKDKEIYRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSGGKKTHISGIMRLDSLGNQLGSSDLPPLTDFTPLIGKTKEQLSVTESGYVPCFSNPIDIQRNQGGIFDSFSNSLIGGDMVSVSQQTGLTSDVNAENSSVVSNFDMGSRRPFNNQQHPPMDLASMWNY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi245g00045 295 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Sebi245g00045 295 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Sebi245g00045 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 246 - -
Sebi245g00045 295 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Sebi245g00045 295 FunFam NAC domain-containing protein 100-like 25 170 - -
Sebi245g00045 295 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi245g00045 Sebi-Chr245 829441 830760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi245g00045 14 295 NAC Transcription Factor Family AT5G07680 56.757 3.30e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi245g00045 NAM 5.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi245g00045 - - cam:101502392 447.588