Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi245g00041 ATGAAGCTTCATTTCAGCAAGATCTACTCATTTGCGTGTGGCAAAACAACTTTTAGGAGAGATCATTCACAGATTGGGGGGCTTGGTTATTCCAGGGTGGTCCTATGCAATGAACCAGATGGCTCTGAGGCAGAGTTTAGGTATTACGCAGATAATTCTGTCAGGTCCACAAAATATACTGTTGCCACTTTCTTGCCTAAGTCACTGTTTGAGCAGTTTAGGAGGGTAGCTAATTTCTATTTCTTGGTAGCTGGTATCTTAGCCTTCACAAAGCTTGCTCCTTATACAGCTGTTAGTGCTGTCTTTCCTCTGTGTATCATCATTGGGGGGACTATGTTGAAAGAGGGTATTGAAGATTGGCGTCGGAAAAAGCAGGATATTAAGGTGAACAATAGAAGAGTTATGTTTCATAGAGGTGATGGAATTTTTGAATATACGGAGTGGAAGAATCTCAGGGTGGGGAATATTGTGAAGATAAAGAAGGATGAATTCTTCCCTGCTGACCTCCTCCTGCTTTCATCTAGTTATGAGGATGCAGTTTGCTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGGTTGGATGTAACTTCTTCCTTAAATGAGGACTTCAAGTTCCGCAATTTTAAAGCTGCGGTCAAATGTGAAGACCCAAATGCAAATTTGTACTCCTTTGTCGGGAGCATGGAGTTTGAAGAGCAAAAATATGCCCTTTCTCCTCAGCAACTTCTTCTGAGAGACTCCAAACTTCGTAATACAGACTACATATTTGGAGCAGTCATCTTTACTGGTCATGATACAAAGGTTATTCAAAATGCCACTGATCCCCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTTGGATCTATTCTCTTTGGCATTGCAACTAAACATGACCTGGACAATGGGAGGATGAAAAGATGGTATCTAAGACCAGATGATTCCGCCATTTTTTTCGATCCAAAAAGATCTACTGCAGCTGGAATATTTCATTTTTTGACAGCCTTAATGTTGTATAGCTTCTTCATTCCCATTTCCTTGTATTTCTCAATAGAAATTGTTAAAATCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGAAGCAGACAGACCAGCTCGCGCTCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGAGTAGCTTATGGCCGTGGTGTTACAGAGGTTGAGCAAGCCATCGGTAGAAGTTATAGTTCACCTATTATTCATGAGCATGTTAATAGGTTAAAATCAGATGAAATCAGGGAATCTCTTGATAGAAAAGTACCCATCAAAGGTTTTAACTTCATAGATGAAAGGATAATGAATGGGAACTGGGTTAATGAGCCTCATGCAGATGTCATACAGAAGTTTTTTCGCTTATTGGCTGTCTGTCATACTGCCGTACCAGAAGTGGATGAAGATACAGGAAAGGTCTCATATGAAGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTTCAAGAGAAGTTGGTTTTAAATTCTATAAAAGGACTCAGACTAGTTTATCAATGTATGAGTTGGATCCAGTTTCTGGTGATGAAGTTGAAAGGATGTACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCGGTGATAGTGAAAGATGAAGAAGGGAGAATTTTGCTACTTTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACTTTGGAGCATGTGCATGAATATGCTGATGCAGGTCTAAGGACCCTAATTCTGGCTTACCGTGAACTTGATGAAGAAGAGTACAAGGAGTTTGATAATAAATTTTCTGAAGTAAAAAATTTAGTTACTATAGATCGGGAAACGCTGATTGAGGAAGTATCAGATAAGATTGAGAGGAATCTATTCCTTCTGGGTGCCACAGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGTATTGACAAGCTTGCCCAAGCTAGAATTAAGATTTGGGTTTTAACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTTCTTGTCGCTTGCTCAGACAAGGAATGAAACAGATCATAATTCATTTGGAGATTCCAGAAATTCAAGCATTGGAGAAGGTTGGAGACAAGATGGCTATTGCTAAGGCATCAAGGGAAAGTGTGCACCGTCAGATATCTGAAGGTGCTAAACTGCTTTCTGCATCCATAGGGACCTCTCAGCAGGCATTTGCTCTGATAATTGATGGAAAATCACTTACTTATGCTCTAGAGGATAATATAAAGAACATGTTTCTAGAGCTTGCAACTCGTTGTGCATCTGTTATCTGCTGTCGCTCATCACCAAAGCAGAAGGCACTGGTTACTAGACTGGTCAAGTCTGGAACTGGTAAAACAACATTAGCCATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCACACGTAGGGGTTGGAATCAGTGGTGCTGAAGGAATGCAGGCTGTTATGTCTAGCGATATTGCGATAGCACAGTTCCGGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTTTTCTACAAGAATATCACATTTGGCTTCACTCTGTTCTTATATGAGGTGTATGCATCATTCTCTGGACAGTCTGCATACAACGACTGGTTTTTATCTCTCTACAGTGTCTTCTTTTCATCACTACCTGTGATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAAATACTGCCTCAAGTTTCCTATCTTATACCAAGAAGGCGTACAAAATGTCCTCTTTAGCTGGCGTCGAATACTCACCTGGATGCTCAATGGATTTATTAGTGCCATAATGATATTTTTCTTCTGCACAAAAGCAATGGAGGTTCAGGCCTTTGATGAGGAGGGAAGAACTGCTGGAAAAGATATGTTGGGAGCAACCATGTATACTTGTGTGGTTTGGGTTGTAAACTTGCAGATGGCACTTACACTACGCTACTTCACCTTGATACAGCATATTTTCATCTGGGGTTCCGTTGCTTTTTGGCATCTCTTCCTCTTAGTATATGGAGTAATGCCTCCAAGCATTTCTAGAAATACTTACAAAGTCTTCATTGAAACTCTTGCTCCATCTCCTTCCTTTTGGATTGTCACATTCTTTGTGGTGATCTCTACACTTATACCATACTTCTCATACTCGGTAATTCAGATGTGGTTCTTTCCCATGTACCACGAAATGGTACAATGGATGAGGTATGAGGGGAAGACAAATGATCCTGAAATACTGTGA 3480 0.4017 MKLHFSKIYSFACGKTTFRRDHSQIGGLGYSRVVLCNEPDGSEAEFRYYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLAPYTAVSAVFPLCIIIGGTMLKEGIEDWRRKKQDIKVNNRRVMFHRGDGIFEYTEWKNLRVGNIVKIKKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLNEDFKFRNFKAAVKCEDPNANLYSFVGSMEFEEQKYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNATDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSILFGIATKHDLDNGRMKRWYLRPDDSAIFFDPKRSTAAGIFHFLTALMLYSFFIPISLYFSIEIVKILQSIFINQDIHMYYEEADRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEQAIGRSYSSPIIHEHVNRLKSDEIRESLDRKVPIKGFNFIDERIMNGNWVNEPHADVIQKFFRLLAVCHTAVPEVDEDTGKVSYEAESPDEAAFVIASREVGFKFYKRTQTSLSMYELDPVSGDEVERMYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLAKNGREFEEKTLEHVHEYADAGLRTLILAYRELDEEEYKEFDNKFSEVKNLVTIDRETLIEEVSDKIERNLFLLGATAVEDKLQNGVPDCIDKLAQARIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKVGDKMAIAKASRESVHRQISEGAKLLSASIGTSQQAFALIIDGKSLTYALEDNIKNMFLELATRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAHVGVGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTLFLYEVYASFSGQSAYNDWFLSLYSVFFSSLPVIALGVLDQDVSAKYCLKFPILYQEGVQNVLFSWRRILTWMLNGFISAIMIFFFCTKAMEVQAFDEEGRTAGKDMLGATMYTCVVWVVNLQMALTLRYFTLIQHIFIWGSVAFWHLFLLVYGVMPPSISRNTYKVFIETLAPSPSFWIVTFFVVISTLIPYFSYSVIQMWFFPMYHEMVQWMRYEGKTNDPEIL 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi245g00041 1159 SFLD C1.7: P-type atpase like 402 911 - -
Sebi245g00041 1159 FunFam Phospholipid-transporting ATPase 537 695 - -
Sebi245g00041 1159 PRINTS P-type cation-transporting ATPase superfamily signature 418 432 - -
Sebi245g00041 1159 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Sebi245g00041 1159 SUPERFAMILY HAD-like 413 915 IPR036412 -
Sebi245g00041 1159 Pfam Phospholipid-translocating ATPase N-terminal 36 99 IPR032631 -
Sebi245g00041 1159 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 486 663 IPR023299 GO:0000166
Sebi245g00041 1159 SFLD p-type atpase 402 911 IPR044492 -
Sebi245g00041 1159 ProSitePatterns E1-E2 ATPases phosphorylation site. 420 426 IPR018303 -
Sebi245g00041 1159 Gene3D - 541 671 IPR023299 GO:0000166
Sebi245g00041 1159 FunFam Phospholipid-transporting ATPase 695 900 - -
Sebi245g00041 1159 Gene3D - 110 280 - -
Sebi245g00041 1159 NCBIfam phospholipid-translocating P-type ATPase 49 1145 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi245g00041 1159 SUPERFAMILY Calcium ATPase, transduction domain A 134 278 IPR008250 -
Sebi245g00041 1159 Pfam Phospholipid-translocating P-type ATPase C-terminal 888 1138 IPR032630 -
Sebi245g00041 1159 Gene3D - 692 900 IPR023214 -
Sebi245g00041 1159 Pfam Cation transport ATPase (P-type) 517 621 - -
Sebi245g00041 1159 CDD P-type_ATPase_APLT_Dnf-like 51 1020 - -
Sebi245g00041 1159 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1149 - -
Sebi245g00041 1159 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1138 IPR023298 -
Sebi245g00041 1159 NCBIfam HAD-IC family P-type ATPase 832 942 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi245g00041 1159 FunFam Phospholipid-transporting ATPase 110 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi245g00041 Sebi-Chr245 712027 719819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi245g00041 3 1157 Primary Pumps ATPases AT1G68710 72.843 0.0 1832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi245g00041 K01530 - gmx:100798329 2036.15