Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi245g00038 ATGAGGGTATGGCTTGGGACATTTGAGACAGCTGAAGAAGCAGAAAGAGCATATGATGAAGCGGCCATTTTGATGAGTGGAAGGAATGCCAAAACAAACTTCCCAGTTGTTGATCACAACCCAATGGGGAATCACATTTCTACTTCTTTAACAACATTGTCTGCAGTTCTGAGTGCAAAGCTAAGGAAGTGTTGCAAGTCCCCTTCACCTTCCCTCACTTGTCTAAGGCTTGACACTGAGAATTCTGACCTTGGGGTGTGGCAGAAGAGAGCAAGACCTTGTTCTGACTCAAACTGGATCATGATGACTGGCACGTTTTCTTATGACCTTGAGAAGCTATCTGATGAGTCAGCTGCAAATTTTGTTATGCAACAACTCAAGAAGATGTTCCCTGATGAAACCAGGCCAAGAGCACCTTTGCAAGAACAAATGGCATTTAGAGGAAGAACAAAGGGCGTTTGA 462 0.4416 MRVWLGTFETAEEAERAYDEAAILMSGRNAKTNFPVVDHNPMGNHISTSLTTLSAVLSAKLRKCCKSPSPSLTCLRLDTENSDLGVWQKRARPCSDSNWIMMTGTFSYDLEKLSDESAANFVMQQLKKMFPDETRPRAPLQEQMAFRGRTKGV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi245g00038 153 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 2 111 - -
Sebi245g00038 153 SMART rav1_2 2 41 IPR001471 GO:0003700|GO:0006355
Sebi245g00038 153 CDD AP2 2 37 IPR001471 GO:0003700|GO:0006355
Sebi245g00038 153 Gene3D AP2/ERF domain 1 37 IPR036955 GO:0003700|GO:0006355
Sebi245g00038 153 SUPERFAMILY DNA-binding domain 2 36 IPR016177 GO:0003677
Sebi245g00038 153 ProSiteProfiles AP2/ERF domain profile. 1 35 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi245g00038 Sebi-Chr245 676507 677086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi245g00038 2 101 AP2-EREBP Transcription Factor Family AT1G15360 64.602 3.79e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi245g00038 - - gmx:100796962 160.614