Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi245g00032 ATGGCGCTGTTCCGAAGGTTCTTCTACCGGAAGCCGCCGGATCGCCTTCTCGAGATCTCTGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGACGAAGATGAGTACAAAGTTTATATTGGGGGCATTGTAACTCAGCTACAAGATCACTTTCCAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAGTTTCAGACATACTGTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCACTTCTGCCTTTGGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGGGGGGGTTGGCCTGTGCTGGCATTTATGCTAGCTGGTCTTTTATTGTACCGGAAACAATACACTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAACAAGCGCCCAGAGAACTTCTCCACCTTTTATCTCCTTTGAACCCACAGCCTTCTCAGTTAAGATATCTCCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGTCTGATTCTTGGAGTCCTTCCTTTATATGATGGTGGAAAAGGATGCAGGCCTGTTGTACGTGTTTATGGTCCGGACCCTTCAAAACCTGTCAATAGAAGTTCTAAGCTTCTTTTCTCAACTTCAAAAACCCAAAAACATGTTCGCCACTACCAACAGGCAGAATGTATGCTCGTAAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTCGTTCTTGAATGCATACATTTAAGTGAAGATTTGGTTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCATTCGTACGGTCAAATATTTTGTTGCTGAGCCGTGATGAAATCGATATTTTGTGGGATGCAAAGGATCAGTTTTCCAAGGATTTTAAATCTGAGGTGCTCTTTTTGGACGCTGATGCTGTTATACCCAACCTAGCCACAGTCATTGTAAGTGGAGATGCAAATGAGACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGCGGAAGAGATCTTCAGCAATGTAATTGATACACAGGAAGGTAAGGGGGATTATGATTCTACAATGGTTCATGACAATGCAGTAGATGATGGAAGTCATAAAGAGGTCTGGAAAGAGTATTCAGATCCTAATACTTTTCAGGATTCCACGCCAGATGATGGGATTCACCAACAGGTGGGAAGGACAGACTGTGGTATTAATGCAGTAAAAGACATTACTGTTGATGATGTGAAGTACAAGCTCAATGAGAGTGTGGATTCAGATACTCATGAAGTCAAAGATATTGTTGTGGATGATGGAGAAAATAAGTTAACTCCCTCTGCAGACACTTCTGATGTGATGAAAACCCAGGAGACAAAGGAAGTCACTATGGATGTGCATGATGAGTTGGCAGCTATGCAAAACATGTATGATGAAGATAACAATGCAGCACAGGAAGAATTAGAGTCTGAGGAAGGGGAGCTGGTGCATGATCTTTCCATATCAAAATCTGATAAACTACTACCATCTGCTGAAAAGAAACAACATCCTTCAAACTCAAAGCCAATGGGGGATACAGTTGCAGCAAAGCAAAAAACTAAACACCAAGAACCACATGGTTTTCAAGCAAAACTAGCAAAACCAAATGCAACAACTAGGTGGATACCTTCTAACAAGGTTACATCCATTCCTCCTCATCTGCCACCTCCCCCTATATCTTCTACAGATAGAGCTCCACTCCTTTCTCCCTCAACACCCCCAACATCACTTAAAGCTCCACTTCCTCCACCTCCACCACCGCCACCCCCTCCTCCTTTATGTAGAGTTCCATCACCATCACCACCACCACCACCTCCACAACCTATAAGTAAATCTCCACCACCACCGCCGCCGCCGCCACTGCATCCTCCTCCTTTATGTAGAGCTCCACCACCACCTCCACCTCCTTTTAGTAGCGCTTTGGCACCACCACCTCCACCTCCACTTCCATCTCCACCTCCTTTTAGTACAGCTCCGTCACCATCACCTCCACCTCCACCTCCTTTTAGTAGAGCTCCACTACCACCACCACCACCTCCACCTCCTTTTAGTACAGTTCCATCACCGCCTACTCCACCTTCTTTTAGTATAGTTCCATTACCACCACCTCCACCTCCTTTTAGTAGAGCTCTACCACCATCACCTCCACCTCCACCTCCACCGCTTCCACCTCACTTTAGTACAGCTCCATTACCACCACTTCTACCTCCTTTTAATAAAGCTCCACCACCATCACCACCACCACCACCTCCCTTTAGTACAGCTCCATTACCACCTCCTCCACCACCACTTCTTCCTCCATCAAGTGGAGCACCACCTCCACCACCACCACCACCTCATCCTCCATCAACTGGAGCATCGCCACCACCACCTCCACCTCCAGCTCCTCTTCTTCCATCAAGTGGAGCACCACCTCCACCACCACCACCACCTTTTCCTCCATCAAGTGGAGCTCCACCACCACCACCACCTATTCCTACACTAAGTGGTGCACCACCTCCACCACCTCTTCCTATGTCAAGTGGAGCTCCACCACCACCACCACCTATTCCTACATCAAGTGGAGCACCACCACCTCTTCCTATATCAAGTGGAGCTCCACCCCTACCCCCACCCCCACCATTTATTCCTACATCAAGTGGAGTACCACCTCCACCACCGCCTCCACCTTTTCTTCCATCAAGTGGAGCTCCACCTCCACCACCACCTCCTTCAATAATGTCTAGAGCCCCACCTCCCCCACCTCCCCCATCTCGTGGAGCTCCGCCACCACCTCCAATGTATGGAGCACCCCCGCCACCACCACCTCCAATGCGTGGAGCTCCACCTCCACCTCCACCGGCTCCAGGGTGTGGAGCACCACCTCCACCACCACCTCCACCTTTTCTTCCATCAAGTGGAGCTCCACCTCCACCACCACTTCCTTCAATGTCTAGAGCCCCACCTCCCCCACCACCTCCAATGTATGGAGCACCCCCGCCACCACCACCTCCAATGCGCGGAGCTCCACCTCCACCTCCACCGGCTCCAGGGTGTGGAGCACCACCTCCTCCACCACCTCCAGGCGGCAGAGGCCCACCTCCACCACCTCCTCCTGGAGCTCGTCCTCCCTGTGCTCCTGCTCCTCCTGGACCTCCAGGTGGTGCACCTCCACCACCTCCTCCCTTAGGCTCCAAAGGTGCAGTTGGAGCCGATCCAAGAGGGAGAGGGCGTGGACTTGCACGCCTTCCAGGTGCTGGTGCAGCGGCAACTAGACGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACAAGAGTTCGACGTTTCAGAATTAGAGAAGCTCTTTTCTGCAAATGTTCCAAAACCTGCTGATTCTGGTGGTAAATCTGGAGGGCAGCGCAAATCTGCTGGATCCAAAACTGACAAAGTCCACTTGATTGACCTAAGGAGAGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTATTGGCTATGGACGAGTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCTACCAAAGAGGAGATGGAACTTTTGAAGGGATACACTGGTGACAAGGAGAAATTGGGAAAGTGCGAACAGATGAAAGTGCCACGAGTGGAGTCAAAATTAAGAGTATTCTCTTTTAAGATTCAGTTTGGGACTCAGATTAAAGAGTTCAAGAAGAGTTTGAACACGGTGAACTCTGCCTGTGATGAGGTCCGAAATTCGCTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTTAAGTTGGATAGTCTTTTAAAGCTCACTGACACCCGTGCTTCTAACAGTAAAATGACTCTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTGCACTCCTTGACTTTCACCTTGACCTTGTTAGCCTGGAAGCAGCCACTAAGATTCAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATCATTAAGGGATTAGAAAAGGTTAAACAGGAGTTTGCTGCATCTGAAAATGATGGTCCTGTATCCGAAGTTTTTCGTAAGACATTGAAAGAATTCATTGCTGTAGCTGAATCAGAGGGGGCATCTTTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCACAATATTTTGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGGTAGGTTGAGCATTGATACTTGTTGGTATGACATGTGGCCATTGTCTTTCTACTAG 4491 0.4745 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLDEDEYKVYIGGIVTQLQDHFPDASFMVFNFREGDRRSQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILGVLPLYDGGKGCRPVVRVYGPDPSKPVNRSSKLLFSTSKTQKHVRHYQQAECMLVKIDIHCRVQGDVVLECIHLSEDLVREEMMFRVMFHTAFVRSNILLLSRDEIDILWDAKDQFSKDFKSEVLFLDADAVIPNLATVIVSGDANETESASPEEFYEAEEIFSNVIDTQEGKGDYDSTMVHDNAVDDGSHKEVWKEYSDPNTFQDSTPDDGIHQQVGRTDCGINAVKDITVDDVKYKLNESVDSDTHEVKDIVVDDGENKLTPSADTSDVMKTQETKEVTMDVHDELAAMQNMYDEDNNAAQEELESEEGELVHDLSISKSDKLLPSAEKKQHPSNSKPMGDTVAAKQKTKHQEPHGFQAKLAKPNATTRWIPSNKVTSIPPHLPPPPISSTDRAPLLSPSTPPTSLKAPLPPPPPPPPPPPLCRVPSPSPPPPPPQPISKSPPPPPPPPLHPPPLCRAPPPPPPPFSSALAPPPPPPLPSPPPFSTAPSPSPPPPPPFSRAPLPPPPPPPPFSTVPSPPTPPSFSIVPLPPPPPPFSRALPPSPPPPPPPLPPHFSTAPLPPLLPPFNKAPPPSPPPPPPFSTAPLPPPPPPLLPPSSGAPPPPPPPPHPPSTGASPPPPPPPAPLLPSSGAPPPPPPPPFPPSSGAPPPPPPIPTLSGAPPPPPLPMSSGAPPPPPPIPTSSGAPPPLPISSGAPPLPPPPPFIPTSSGVPPPPPPPPFLPSSGAPPPPPPPSIMSRAPPPPPPPSRGAPPPPPMYGAPPPPPPPMRGAPPPPPPAPGCGAPPPPPPPPFLPSSGAPPPPPLPSMSRAPPPPPPPMYGAPPPPPPPMRGAPPPPPPAPGCGAPPPPPPPGGRGPPPPPPPGARPPCAPAPPGPPGGAPPPPPPLGSKGAVGADPRGRGRGLARLPGAGAAATRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAQEFDVSELEKLFSANVPKPADSGGKSGGQRKSAGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKEKLGKCEQMKVPRVESKLRVFSFKIQFGTQIKEFKKSLNTVNSACDEVRNSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPALLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFAASENDGPVSEVFRKTLKEFIAVAESEGASLTNLYSVVGRNADALAQYFGEDPARCPFEQGRLSIDTCWYDMWPLSFY 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi245g00032 1496 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Sebi245g00032 1496 Gene3D Formin, FH2 domain 1121 1481 IPR042201 -
Sebi245g00032 1496 SMART PTEN_C2_2 198 1173 IPR014020 -
Sebi245g00032 1496 SMART it6_source 570 1496 IPR015425 -
Sebi245g00032 1496 Coils Coil 1397 1417 - -
Sebi245g00032 1496 Coils Coil 502 522 - -
Sebi245g00032 1496 MobiDBLite consensus disorder prediction 614 1100 - -
Sebi245g00032 1496 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Sebi245g00032 1496 MobiDBLite consensus disorder prediction 1174 1198 - -
Sebi245g00032 1496 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1197 1478 - -
Sebi245g00032 1496 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Sebi245g00032 1496 PRINTS Proline rich extensin signature 645 661 - -
Sebi245g00032 1496 PRINTS Proline rich extensin signature 612 624 - -
Sebi245g00032 1496 PRINTS Proline rich extensin signature 663 680 - -
Sebi245g00032 1496 PRINTS Proline rich extensin signature 624 645 - -
Sebi245g00032 1496 Pfam Formin Homology 2 Domain 1126 1478 IPR015425 -
Sebi245g00032 1496 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Sebi245g00032 1496 MobiDBLite consensus disorder prediction 590 604 - -
Sebi245g00032 1496 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1120 1496 IPR015425 -
Sebi245g00032 1496 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Sebi245g00032 1496 PANTHER FORMIN-J 1 693 - -
Sebi245g00032 1496 CDD PTP_PTEN-like 16 190 - -
Sebi245g00032 1496 Gene3D - 205 336 - -
Sebi245g00032 1496 MobiDBLite consensus disorder prediction 530 1128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi245g00032 Sebi-Chr245 620826 634076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi245g00032 1097 1478 FH2 protein (formin) Gene Family AT5G07740 79.434 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi245g00032 - - lang:109327684 966.837