Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi244g00060 ATGCGGCAAAGGCGTGAAACTGCTTCAGCAGCATCTAAAGGGTCAAGTAGTGGCGATGCAAGTGAAAAGTCTACTAATGGTGCTGAAATCCACACCACTATTCATGTTGGAAACTCAAGGAGGTCTTCATTTGTGTGGCTGGCCTTGTTCCTTATAATCACTTATTGCTGTTCAGCCATTTATAATTACCAGTTTCAGAGCATGCCCTTGCCTCTTACTGCAGAACAAGCTGGCAAGAGGGGTTTCTCGGAGATTGAAGCATTCAACCATGTCAAGGCCTTGACTGAGGTGGGCCCTCATCCTGTTGGTTCTGAAGCTCTGCATCAAGCACTCCAGTATGTTCTGACAGCATGTCAAACTATTAAGAAAACAGCTCACTGGGAGGTGGATGTTGAAGTGGATCTTTTTCATGCAAAGTCTGGTGCAAATCGTCTGGAGGGTTGGCAATGGTTTCATAGTGGGAAGTATTATTGGAGCCAAGGTTGTCAAACTCCAGAAGAAGGGGCTGGAGATTGCAGTTCATGTGTAGGTGTTATGCTGGAACTTGCTCGTGGAATTTCTCAGTGGGCTCATGGTTTGAAGAATGCTGTTATATTCTTATTTAATACTGGTGAGGAGGAGGGTCTTAATGGCGCTCATAGCTTCATAATGCAGCATCCTTGGAGTAAAACTGTTCGTATGGCTGTTGATCTAGAGGCCATGGGAATTGGAGGGAAGTCTAGTATTTTTCAGGCTGGTCCCCATCCATGGGCAATTGAGAACTTTGCTTCAGCGGCAAAATACCCATCTGGTCAAATTATCGCACAGGATCTTTTTTCTTCGGGGGCCATAAAATCTGCTACAGATTTTCAAGTGTACAAAGAGGTTGCTGGCCTTTCTGGGCTTGATTTTGCGTACCTAGATAACACTGCTGTATATCATACCAAGAATGACAAATTAGAGCTTTTGAAGAAAGGATCTCTTCAACATCTGGGGGAAAATATGCTTGCTTTCCTGCTTCATATTGGTGCATCTGCTCATTTTCCAGAACGCAATTCAACAGAAACAGAGGAAGATATGAGCAATAACAATGCCATATATTTTGACATTTTGGGAACATATATGGTTGTATACCGTCAAAAGTTTGCTAATATGCTCCATAATTCAGTGATAATGCAGTCACTTCTAATATGGATTACATCATTGGTTATGGGTGGTATACCGGCTGCAGCTTCATTGGCCTTGTCGTGTCTGGGTGTTCTCCTCATGTGGGTGTTTGCCTTGAGTTTCTCCCTCCTTGTTGGCTTTCTTCTACCTTCAATATCTTCATCACCAGTGCCATATGTTTCAAGCCCTTGGTTGGTGGTTGGATTATTTGGCGCACCAGCATTTCTTGGAGCATTGACTGGTCAACATTTGGGTTATCTTCTACTGCAAAAATATCTCTTGAATGTACATTCAAAGAGAAGGCAATGGCCCCCCATTATTCTATCTGATCTTGTCAAGCTGGAGGCTGAAAGATGGCTCTATAAAGCTGGATCCTTTCAGTGGCTTATTCTTCTCATTGTGGGAAACTATTTTAAAATTGGGTCTTCTTACTTGGCTCTTTTTTGGTTAGTTTCTCCGGCATTTGCATATGGATTTTTTGAAGCAACGCTAGCCCCTGCCAGGTTACCAAAGCCACTCAAACTGGCAACCCTAATTCTAGGGTTAGCCACACCAATTTTAATTTCTGCTGGCACTTTTATTCGGCTAGCTGCTACAGTCATAGGGGGTATGGTTCGACTTGATAGGAATCCCGGTAGTACTCCTGAATGGCTGGGAAATTTTATGATTGCTGCTTTTATTGCTGCTCTCTTGTCTTTGACCTTGGTGTATCTTCTTTCATATGTCCATCTTTCAGGTGCGAAAAGGGCAATCATCCTAGCTACTCTGGTGCTGTTTAGTCTATCACTTGCAATTGTATTATCAGGTGTTGTTCCACCATTTTCTGAAGACACTGCCAGAGCTGTGAATGTTGTACATGTTGTGGATGCAACAGGAAGGATTGATGAAAGACAGAATCCTGCATCATATGTATCTTTATTTTCAACTACACCTGGAAATTTGAACAAGGAGGTAGAACAGATAAATGAAGGCTTTGTATGTGGCAAAGATAAAGCAGTTGATTTTGTGACTTTCTCGGTCAAATATGGTTGCTGGACCTATAATGACACTATGAGTGGCTGGAGTGAGACTGATATTCCTACAATGCAAGTCAATGGTGATGCTAAAGGAAATGGAAGAATTACACAAGTTTCAATCAATACAAAGGATTCCGTTCGTTGGGTTCTGGCAATCAATACAGAAGAAATAGAAGATTTCAAGCTTAAAGATACAAGGAATTCTGAAGAATTAATATCAGTGGACAAAAAGAGTAGTGTGGATGGCTGGCACACTATTCAGTTTTCTGGAGGAAAGAATGCACCAACATTGTTTGATATGACTCTTTACTGGAAGTCAGGTTCAACTCATAGCACTGATGGTTCTCTTCTGAAACTTCGGACTGATGTGGACAGATTAACACCAATAACTGAACGAGTTCTTGAGAAACTTCCTCGTTGTTCCAACAAAATGCACATGCACTGTACTGAGCAGCCATCTGGAGAAGGTTTTGTCACCATTCGGATCAGTGAGCTGAGAGACCAAAGCACCCTCCACGAAATGCGGTCAATTCCTCTGGGAACCTCACTATCTCCAACTCCTTTAAACTCCTCAAAAATCTCACCTTTCAATATTAATTGCAAGAAATCAAGCTCTTTCCCATCTTGGGTTTCATCTCCATCTCATGATTTCTCTTTCCTTTCTCTCTCCAAATCAGGATTATGTAGAGCCAGTCAAATTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTCCGGGAGGCAAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGTTGAGGATGGACAGAATGGTGGCTATGTTAGCAGGATTCTCTATACCAAATGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGCAGCTCACTTGATCAAACTTTCTTATTTGGAAGTGAAGATTTCAAGATTGGTGGTTTTGATGGGAAATTTAGCCTCAACAAGGGATATGTAGCTGGCATATTAACAGTAGATACTGTTGCAGACTTTCTACCTAGAAAGGGGCCACTGAGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTGAGGGAAAAATTTAGGCAAAGAGGAATAGCTAAACAATTGGTAGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCCATTGCATTACACTGTGATTTGAGAAACCCTGTGGCTACAAAGTTATATCAAGGCCAAGGTTTCAAATGTATAAAGGTTCCTGAAGGAGCTAAGTGGCCTCAACCAAAGACCTCACCGGATATTAAGTTTAATTTTATGATGAAGCTTCTCAACAAATCAGCTGCTTCTAAATCTAATTAG 3534 0.4199 MRQRRETASAASKGSSSGDASEKSTNGAEIHTTIHVGNSRRSSFVWLALFLIITYCCSAIYNYQFQSMPLPLTAEQAGKRGFSEIEAFNHVKALTEVGPHPVGSEALHQALQYVLTACQTIKKTAHWEVDVEVDLFHAKSGANRLEGWQWFHSGKYYWSQGCQTPEEGAGDCSSCVGVMLELARGISQWAHGLKNAVIFLFNTGEEEGLNGAHSFIMQHPWSKTVRMAVDLEAMGIGGKSSIFQAGPHPWAIENFASAAKYPSGQIIAQDLFSSGAIKSATDFQVYKEVAGLSGLDFAYLDNTAVYHTKNDKLELLKKGSLQHLGENMLAFLLHIGASAHFPERNSTETEEDMSNNNAIYFDILGTYMVVYRQKFANMLHNSVIMQSLLIWITSLVMGGIPAAASLALSCLGVLLMWVFALSFSLLVGFLLPSISSSPVPYVSSPWLVVGLFGAPAFLGALTGQHLGYLLLQKYLLNVHSKRRQWPPIILSDLVKLEAERWLYKAGSFQWLILLIVGNYFKIGSSYLALFWLVSPAFAYGFFEATLAPARLPKPLKLATLILGLATPILISAGTFIRLAATVIGGMVRLDRNPGSTPEWLGNFMIAAFIAALLSLTLVYLLSYVHLSGAKRAIILATLVLFSLSLAIVLSGVVPPFSEDTARAVNVVHVVDATGRIDERQNPASYVSLFSTTPGNLNKEVEQINEGFVCGKDKAVDFVTFSVKYGCWTYNDTMSGWSETDIPTMQVNGDAKGNGRITQVSINTKDSVRWVLAINTEEIEDFKLKDTRNSEELISVDKKSSVDGWHTIQFSGGKNAPTLFDMTLYWKSGSTHSTDGSLLKLRTDVDRLTPITERVLEKLPRCSNKMHMHCTEQPSGEGFVTIRISELRDQSTLHEMRSIPLGTSLSPTPLNSSKISPFNINCKKSSSFPSWVSSPSHDFSFLSLSKSGLCRASQIVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRMVAMLAGFSIPNGCKRTCLVAVIGSSLDQTFLFGSEDFKIGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRQRGIAKQLVAKAESQARSWGCRAIALHCDLRNPVATKLYQGQGFKCIKVPEGAKWPQPKTSPDIKFNFMMKLLNKSAASKSN 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi244g00060 1177 CDD NAT_SF 1081 1122 - -
Sebi244g00060 1177 Gene3D Zn peptidases 73 353 - -
Sebi244g00060 1177 Pfam Peptidase family M28 166 331 IPR007484 -
Sebi244g00060 1177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 961 1156 IPR016181 -
Sebi244g00060 1177 MobiDBLite consensus disorder prediction 8 26 - -
Sebi244g00060 1177 Pfam Acetyltransferase (GNAT) family 1056 1139 IPR000182 GO:0016747
Sebi244g00060 1177 SUPERFAMILY Zn-dependent exopeptidases 69 335 - -
Sebi244g00060 1177 MobiDBLite consensus disorder prediction 1 26 - -
Sebi244g00060 1177 CDD M28_Fxna_like 79 371 - -
Sebi244g00060 1177 Gene3D - 962 1143 - -
Sebi244g00060 1177 FunFam Endoplasmic reticulum metallopeptidase 1 162 352 - -
Sebi244g00060 1177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 895 1172 - -
Sebi244g00060 1177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 965 1170 IPR000182 GO:0016747
Sebi244g00060 1177 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 965 1166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi244g00060 Sebi-Chr244 1068388 1088338 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sebi244g00060 Peptidase_M28 1.5e-32 CL0035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi244g00060 - - gmx:100803587 1399.03